Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01903 atgaatccTCGACATCTAGAACCCTATATAAACCGCCAATTCTTAATCAAAATCAGAAACATTTTCCGTCTCATTTCTCAAAAAACTCAAAGCCTAATGACGAACCCAACTCCCTCTCCTTCATCAACACCTCCACCTTTCGACCCAAAACAACCCTCAATTCCCATTTCATATCCAATCAAAACCCTTCAAGACCTTCAATTTCGTACTTATTTTGATTCCTTTCATTATCCTTTTAACAAATCTTCAGTTccaatttcatcttcttcttctttgttacCTAATAGACGTAGATTGTTAGTTTGTCATGATATGGCTGGTGGTTATATAGATGATAAATGGATTCAAGGTGGTAATAATCCTGATGCTTATTCTATTTGGCATTGGcatttaattgatgtttttgtttatttttctcattctcttgTTACTATTCCTCCTCCTTCTTGGGTTAATACTGCTCATCGGCATGGTGTTAAGGTGTTGGGGACTTTCATCACCGAATGGGATGAGGGAAAGGCTAACTGTGATATACTACTTTCAACAAAGGAGTCTGCACGAATGTATGCAGAACGTCTAACAGAGCTTGCTGTTCATTTAGGCTTCGATGGGTGGCTGATAAATATGGAGGTAGAGTTGGATCCCGCgcaaattcctaatttgaaGGAGTTTGTCGACCATTTATCATTAACAATGCATTTTTCTATGCCAGGGTCATTAGTGATTTGGTATGACAGTGTTACCATTGATGGTAAACTGAATTGGCAAGATCAACTAAATGAATATAACAAGCCGTTTTTTGATATATGTGATGGAATATTTGTAAACTATACATGGAAGGAAGACTATCCAAGGCTCTCTGCTGCTGTGGCTGGTGATCGGAAGTTCGATGTATACATGggaattgatgtatttggaaGGAACACATTTGGTGGTGGACAATGGAATGCAAATGTTGCTCTTGATGTACTAAGAAAGAATGACGTCTCTGCTGCAATATTTGCTCCCGGATGGGTCTATGAGACAAAGCAACCACCAGATTTTGAGACTGCTCAGAACAGTTGGTGGGGTCTTGTGGAGAAATCTTGGGGAGCACTGCGAAATTATAAGGGACCACTACCGTTATATTCAAATTTCGACCAGGGACGTGGTTATCATATTTCAGTTGATGGAAACAATGTTTCAGATGCTACATGGTGCAACATTTCTTGCCAAGGCTTTCAGCCACTCCTTGAGCTTGCTGATCCTAGAAATCCTATTCAAGTTAGTATAGACTTGAAGGAAGCATCATATAGTGGAGGGGGGAACATTACGTTCAAAGGATCTCTTGAAGAACAAACTCACTTTGAGAGGAAAATTTTTCAAGGGGAATTTCTATTGAGCGAGTTGCCAATCCACTTTATTTATTCTGTGAAATCTAATGGCAATTCTTCATTAGGACTTAAGCTTGTGTTCACTTCCAACGACGTCGAAAACTTTTCTGTACTTCTCACATCCCAGGTAGAGAATCATATCTCAAGTAAATTCAACAAAGTAATCACGGCACATGAACATAAGGGATCTTCTCCTGTATGGGTTATAAACGAAAGTGCAATTACAATGAACGGATACACGTTAACTGAAATCCATGCAGTCTGCTTCCGATCAAATTCCTCATTATCAGATTGCAAAGATTGTACTGTGACTTCTCCATCGGATTATTATGCACTTCTTGGTCATCTTACAATCAAGAATTCCGACTCTAAGTCAGATTTTCCCGTTTGTTCTTCTTGGCTAGTTGatggaaaatatataaaatggacATCAGGTTCCGACGGTTCAAAAACGCTTAACGTTAAAATTTCATGGACACTGAAAGATGGAAACAATTATCTCTCTCTGAAATACAACATTTATTTGGTGAAGTTATTAAAACAAGCCGGAGCAGGTGCAACTTTAGAACCAACAAAGGAGGAGTACCTTGGAGTAGCACAAGTTAACTGTTTTTATGTTTCCGATCTTGAAGTTCCTTCAGATACTTCTAGTctcaaatttataatacaaGTGTGTAGTGTGGATGGGACAATTCAGGCATTGGATGAGTCTCCATATTATGAATTGGAAGTTGAAAGTCCCTAA 2118 0.3664 MNPRHLEPYINRQFLIKIRNIFRLISQKTQSLMTNPTPSPSSTPPPFDPKQPSIPISYPIKTLQDLQFRTYFDSFHYPFNKSSVPISSSSSLLPNRRRLLVCHDMAGGYIDDKWIQGGNNPDAYSIWHWHLIDVFVYFSHSLVTIPPPSWVNTAHRHGVKVLGTFITEWDEGKANCDILLSTKESARMYAERLTELAVHLGFDGWLINMEVELDPAQIPNLKEFVDHLSLTMHFSMPGSLVIWYDSVTIDGKLNWQDQLNEYNKPFFDICDGIFVNYTWKEDYPRLSAAVAGDRKFDVYMGIDVFGRNTFGGGQWNANVALDVLRKNDVSAAIFAPGWVYETKQPPDFETAQNSWWGLVEKSWGALRNYKGPLPLYSNFDQGRGYHISVDGNNVSDATWCNISCQGFQPLLELADPRNPIQVSIDLKEASYSGGGNITFKGSLEEQTHFERKIFQGEFLLSELPIHFIYSVKSNGNSSLGLKLVFTSNDVENFSVLLTSQVENHISSKFNKVITAHEHKGSSPVWVINESAITMNGYTLTEIHAVCFRSNSSLSDCKDCTVTSPSDYYALLGHLTIKNSDSKSDFPVCSSWLVDGKYIKWTSGSDGSKTLNVKISWTLKDGNNYLSLKYNIYLVKLLKQAGAGATLEPTKEEYLGVAQVNCFYVSDLEVPSDTSSLKFIIQVCSVDGTIQALDESPYYELEVESP 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01903 705 CDD GH85_ENGase 100 410 - -
Tsu03g01903 705 PANTHER BETA N-ACETYLGLUCOSAMINIDASE, PUTATIVE-RELATED 6 704 - -
Tsu03g01903 705 Pfam Glycosyl hydrolase family 85 111 386 IPR005201 GO:0005737|GO:0033925
Tsu03g01903 705 Gene3D - 372 535 - -
Tsu03g01903 705 Gene3D Glycosidases 50 370 - -
Tsu03g01903 705 PANTHER ENDO BETA N-ACETYLGLUCOSAMINIDASE 6 704 IPR032979 GO:0033925
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01903 6 695 Glycoside Hydrolase AT3G11040 49.795 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01903 K01227 - gmx:100806475 1104.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01903 03 19700201 19706373 Tsu03g01903 03 19700201 19706373 ECH