Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01884 ATGGCGAACGTTGATGAACTCATATCTCCGATATTCTCAGATATCAACACTTACACAGGCAAAGACCCTCTTCTTCCTTGGCTCCGAGGAATCCGAAAGATGAAGGAAACTCTTCCCTCAAAAACCCTCAAAGAAAAACTACCTGAGTTCTTGCGGAAATGCGCACAAACATTTGAGCTCGATCGACGTTATAGAAACGATTTGCGTTATCTTCGTGTTTGGCTCCACTTGATGGATTTTGTTGATGATCCGAGTGCATTGCTGAGAACTATGGAGGTTAATCAAATCGGAACAAAACGTTGTCAATTCTATCAAGCATATGCTCTTTACTATGAGAAGAGTAAGAATTATGATGAAGCAGAGAAAATGTATCATATGGGAGTCAAGAACCTTGCAGAACCTGTCGACGAATTGCAGAAATCTTATGAACAATTTCTTCAACGCATGAAGCGcaagaaaaaaattcagGAAATGAAAGCTGCTGATAGACGTGTAAAGGCTAAAAATGATGAGAGCAAGAGATTTCGTGGTGATCATACAGTTGTAATCAACAAGTTTGTTGACACTGCCATGGATGGAAAGTCGGAAGCAGAAAATGCATGCCATCATGGACTAGTTGATCCGACAATAAATATGAAGGAGGCCATGAATGCCATTAACAGCATGTTCAGTGAGCCATTAGAGACTGTTCCTTTGGCTAGGAAAtcacataaaaacaaatcaaaagaaagttGCAGTACACAGAACAACTTTGAAGTTTTTGTTGATGAAAACTTGGACAATGAAATTAAACCAAGTGGTTCCTTATCGCTTCAGCAAAGGACCGAAGCTAGCAAACCTCAACAAGAGTCACTCCAGATATATATTGACGATGAAGGATGTTCAGAAGGTTCTACTTCATCCGCTCCAAAAACAAATGGCTTTGTTTTTCCCCGACCTAAGGATGTTTGTTCTGAGAAATCTAGGGATATGGATGCACAAAGGTGTGGTAATTCAAAGTTCAGAGAGGATACAGTTGTTCGAAGATTTGTTGGTTCTGCCATTTTGGATGAACCAAAAGTGGAGAATGCTTGTCACCACGGCTTAGTAGACCCCACAATCAACATGAAGGAAGCAATGAATGACATAAATAGCATGTTTGGGAAGCCAATAGATTTTGTTAGAAAAAAAAGATCAGCGAAGCAGGAGAAAGCACCGGAGAACAATAGCGGAAAGGACTTTGGTGGTGGGTTTTCAATCCTtgctgatgatgatgatgacctTCAACAGAAACATCGTCCTCCACTACCAAAACCGCTAGCAAAGTCGAAGGGATCAGATTTATTTGAGCCAACTCTCCACACAAAGGAAGCCATGGATGACATTAACAAGATGTTTAATATGCCTTTGGATTTTTAG 1398 0.3891 MANVDELISPIFSDINTYTGKDPLLPWLRGIRKMKETLPSKTLKEKLPEFLRKCAQTFELDRRYRNDLRYLRVWLHLMDFVDDPSALLRTMEVNQIGTKRCQFYQAYALYYEKSKNYDEAEKMYHMGVKNLAEPVDELQKSYEQFLQRMKRKKKIQEMKAADRRVKAKNDESKRFRGDHTVVINKFVDTAMDGKSEAENACHHGLVDPTINMKEAMNAINSMFSEPLETVPLARKSHKNKSKESCSTQNNFEVFVDENLDNEIKPSGSLSLQQRTEASKPQQESLQIYIDDEGCSEGSTSSAPKTNGFVFPRPKDVCSEKSRDMDAQRCGNSKFREDTVVRRFVGSAILDEPKVENACHHGLVDPTINMKEAMNDINSMFGKPIDFVRKKRSAKQEKAPENNSGKDFGGGFSILADDDDDLQQKHRPPLPKPLAKSKGSDLFEPTLHTKEAMDDINKMFNMPLDF 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01884 465 MobiDBLite consensus disorder prediction 292 311 - -
Tsu03g01884 465 Pfam Mad3/BUB1 homology region 1 14 128 IPR013212 -
Tsu03g01884 465 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 4 161 IPR015661 GO:0007094
Tsu03g01884 465 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 159 465 IPR015661 GO:0007094
Tsu03g01884 465 SMART mad3_bub1_i 4 128 IPR013212 -
Tsu03g01884 465 PANTHER OS11G0128700 PROTEIN 159 465 - -
Tsu03g01884 465 PANTHER OS11G0128700 PROTEIN 4 161 - -
Tsu03g01884 465 MobiDBLite consensus disorder prediction 264 283 - -
Tsu03g01884 465 Gene3D - 11 167 - -
Tsu03g01884 465 MobiDBLite consensus disorder prediction 390 441 - -
Tsu03g01884 465 ProSiteProfiles BUB1 N-terminal domain profile. 11 170 IPR013212 -
Tsu03g01884 465 Coils Coil 135 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01884 Tsu-Chr3 19517095 19519513 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01884 - - mtr:MTR_3g071460 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01884 03 19517095 19519513 Tsu03g01884 03 19517095 19519513 ECH