Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01856 atgACCACACTTTATTCACCTTCTTCCGCCGCAAAACCCACCATGGAAGACACCAACAACCGCCGTTCAAAGAAGAATCGCCGTCGTCCCTCAGCTACTCCAACAAACGGCGAGTATTCCGACGTTGAAGATGCAGAAGACTGCGATCCAGAGGCATGGGCAACACTTAACAAGAGTTTCCGGCAGGTTCAGTCGGTGCTTGACCGGAACAGAGCAATTATTCAACAGGTGAATGAGAATCAACAATCTAGAATGCCTGATAATATGGtgaaaaatgtttctttgaTTCAAGAATTGAATGGGAATATCTCTAAGGTTGCTTCTCTTTATTCTGATCTTAATTCTGATTTTACTAATATTTGTCATCAACAACAACGATCTTTAAACACACGTGGTGGCAAATAA 405 0.4099 MTTLYSPSSAAKPTMEDTNNRRSKKNRRRPSATPTNGEYSDVEDAEDCDPEAWATLNKSFRQVQSVLDRNRAIIQQVNENQQSRMPDNMVKNVSLIQELNGNISKVASLYSDLNSDFTNICHQQQRSLNTRGGK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01856 134 MobiDBLite consensus disorder prediction 1 16 - -
Tsu03g01856 134 PANTHER PROTEIN ELF4-LIKE 4 18 127 IPR040462 GO:0042753
Tsu03g01856 134 Pfam Early Flowering 4 domain 48 126 IPR009741 -
Tsu03g01856 134 MobiDBLite consensus disorder prediction 1 47 - -
Tsu03g01856 134 PANTHER PROTEIN EARLY FLOWERING 4 18 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01856 Tsu-Chr3 19156507 19157527 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01856 - - ahf:112715393 163.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01856 03 19156507 19157527 Tsu03g01856 03 19156507 19157527 ECH