Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01853 ATGGCTTCGTTATGGCGCGCAGGGACCAAGCTAACTCTCCTAGCATCCGCCCTAGGCGGCGGTGGCGCAGCAGCCCTCATTGCCACCTCCGACGATCCTGCAACAGCGCTCAAGCTCTCCACAACCGTCCCTCGTCGTCTCTTTGACGACGCCGTCGCTGCCGCCAACATTGTCTTCGATTATGAATATTCACTGTGGGGAATCCCGGAAGGGAGTAATAAGAGGGAGAAAATCAAGCACGAAGTTCACCTCCGTTCGGCGGAAAAGCTTCGAGACTTGTGTTTTAAGAATGGAGGGATTTATATAAAGCTTGGACAACATCTTGGGCAATTGGAATATTTAGTTCCTCAAGAGTATGTTCAGACCATGAGGGAGTCCATGCTAAATAAATGTCCGGTTTCTTCGTATGAACAAATATGTGATGTATTCAAGAAAGAGTTTGGAGAGACACCAGATAAAGTATTTGCCGAGTTTGATCCAGTTCCAATAGCAAGTGCTTCCCTTGCTCAAGTTCACGTAGCCCGCACACATGATGGCCAAAAAGTTGCTGTGAAGGTCCAACATCCTCACATGACTGAAACTGCGGCTGCTGATCAAGCCACTGTGGAATTGATTGTGAACACTctgcataatttttttcctaGTTTTGATTATAGGTGGTTGATTGATGAGATTAAAGAGAGTTTGCCCCAGGAATTGGACTTCTTAACTGAGGCAAAGAACAGTGAGAAGTGTTTGGAGAACTTCCGAAAATTGTCTCCTCATATTGCAAGTTATGTATATGCACCAAAAGTATATTGGAATCTAAGTACCTCAAAGCTGCTTACAATGGAATACATGGATGGTGCTTATGTAAATGATGTGAAGGCCATAAAGAAACTAGGGATCCGTCCACATGAACTTTCAGTATTGGTTAGTCAAACTTTTGCTGAAATGATGTTCAAGCACGGGTTTGTACATTGTGATCCACATGCTGCTAATATGTTGGTTCGCCCAATGCCTTCCAGCAAAGCTAGCATTCTAGGCTGGAGAAAACCACAGTTGATTCTTTTAGACCATGGACTCTATAGAGAGCTTGACTTCAATACAAGAGCTAATTATGCTGCACTATGGAAGGCATTAATATTTTCTGATGCTAATGGGATCAAGGAATGCAGTATAAAGTTGGGTGTTGGGGAGGATTTATATCCACTTTTTGCTGGAGTTCTAACAATGAGACCTTGGAATAGAGTTATTGACCCATCCATGGATCATTTAGTTATACATGGAAGCGAGAGTGACCGTTCAGAACTGCAGATGTATGCTTCTGAATATTTCCATGAAATCTCTGAGCTTCTAAGGAGACTACCACGTGTGATTCTTCTAATGATGAAGACAAATGACTGTTTACGAGCAGTCAACAATACCCTGATACAGGGATCATCTCTCGagacattttttatcattggaaaGGTTTCTTCCGAGGCTGTCATCGAGGCAAAAATGTCACAAAGCAAGTCAGTTTTAACTTGGTTTAACATTAAATTGGATAAGATTGTGCTGGAAATGCGGCTTTGGGCAATGCAGATGGCCCTGTTGCTTTTACAACTGAGAAAGGCTTTGCCTTGGTCTCACTAA 1617 0.4236 MASLWRAGTKLTLLASALGGGGAAALIATSDDPATALKLSTTVPRRLFDDAVAAANIVFDYEYSLWGIPEGSNKREKIKHEVHLRSAEKLRDLCFKNGGIYIKLGQHLGQLEYLVPQEYVQTMRESMLNKCPVSSYEQICDVFKKEFGETPDKVFAEFDPVPIASASLAQVHVARTHDGQKVAVKVQHPHMTETAAADQATVELIVNTLHNFFPSFDYRWLIDEIKESLPQELDFLTEAKNSEKCLENFRKLSPHIASYVYAPKVYWNLSTSKLLTMEYMDGAYVNDVKAIKKLGIRPHELSVLVSQTFAEMMFKHGFVHCDPHAANMLVRPMPSSKASILGWRKPQLILLDHGLYRELDFNTRANYAALWKALIFSDANGIKECSIKLGVGEDLYPLFAGVLTMRPWNRVIDPSMDHLVIHGSESDRSELQMYASEYFHEISELLRRLPRVILLMMKTNDCLRAVNNTLIQGSSLETFFIIGKVSSEAVIEAKMSQSKSVLTWFNIKLDKIVLEMRLWAMQMALLLLQLRKALPWSH 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01853 538 PANTHER ABC1 FAMILY PROTEIN 7 531 - -
Tsu03g01853 538 SUPERFAMILY Protein kinase-like (PK-like) 132 331 IPR011009 -
Tsu03g01853 538 Pfam ABC1 atypical kinase-like domain 127 385 IPR004147 -
Tsu03g01853 538 CDD ADCK1-like 126 390 IPR045307 -
Tsu03g01853 538 PANTHER BNAC04G05270D PROTEIN 7 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01853 Tsu-Chr3 19086885 19093362 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01853 K08869 - gmx:100796182 894.034