Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01840 ATGTCGAGTAGGATGAGGAACGAGGCTAGCAGTAGCAGCAAAACCCCAAAGGAAAGCGTCGTTGTTGATTATGGAAAGCATCGAAGCTCTTGTGGTTATTGTAGATCCCCTCGTCACAATAGCATCTCTCATGGCATGTTGGCAGAGAGCCTTACTGTGGATGACTATCAAGCACTTCTTGATCAGGGCTGGAGAAGATCTGGATGTTTTCTTTATAAACCAGAGATGGATAAAACATGTTGCCCTTCGTATACAATCCGCTTGAAAGCAAGTGACTTTGTTCCCTCTAAGGATCAACTTCGTGTATCTAGACGAATGCAAAGGTTTTTAGATGGAACCTTGGATGTTAAAAGAGTTGATGTCATGAAGGAATCAAATACTTCAAATTCAGAAAGCCTTGTCCATAATAACCCATCATGCTCCATGTCAGAAGAATCTCTATCTGTTGCCAACAAAGGGGTGGCTGAAGATGAAAAATCTTTGCACGATATATCGGAACAGATTGATAATGTAACACACATGTTCACCAAGAACGGGGAATTTCCATCTGATATTCAATTACCAAAAGCTTCAGTCAGAATGGTTTCACAGGGGAAAAAGAAGTTCTTAGCCAAAGGACCCGAAGATCTATTATATAGTAGCAATATAGCCTTTCAAGTTGCTGCATCTATAAACCGAGCACAGTCGAAGGACAAGGATGGTAGTGATTCCAAACCATCAAGAGATAGTGAGAAGGAAAATGGATTTTCTCCTAAAGTTATTGCAGAAAAGCTGGTAGCATCTTTAGATTCAATAATGAAAAATTCTGGTTTGGCTATTAAGGCTTGCAATGGACATGTCAATTTTTATGCTTCTAGTAAGCAAGTTTCCCAAAATGGAACTGTTCAAAATGCTGCAATTCCTAAAAAATCTGGAATGAAGTGTCAGTTTAAAAAGCGAAAGCTTGAGATCCGTTTGAACAGATCCAGTTTTGATCCAGAAGAACATGCTTTATTTGCAAGATATCAGAGCAAAGTACATAATGATAAACCAGCAAATTACACGGAGAGCTCATATCGCAGGTTTTTGGTTGATACTCCATTATTATATGTTTCACCTACTGGTGATAACACAGTCCCTCCTTGTGGTTTTGGCTCTTTCCATCAACAGTATTTGGTGGACGGTCAGTTAGTAGCAGTTGGGGTTATAGACATCCTTCCTAACTGTTTATCAAGTAAATATTTGTTCTGGGATCCAGACTTTGCCTTTCTATCACTAGGCAAGTACTCTGCACTTCAAGAAATTGGTTGGGTGAAGGATAACCAGGTTTATTGTCCTAGTCTCCAGTACTATTACCTTGGCTACTATATTCACTCTTGCAACAAGATGAGATACAAGGCTGCATATCGCCCTTCAGAACTTTTATGTCCTCTTCGTTATCAGTGGGTTTCATTTGACATTGCAAGGCCTTTGCTTGACAGAAAGCGTTATGTTGTTTTATCTGATGCCTCCATTTTACAACATGGAGAGTCATCACCACTTCAAGTTTCTGAAGATCAAGATGCAATGTTAATCCAGCTTGATGACGGTGATCAAGAAGATGCAAATGATGTTCCAATGCATGAAGATGAAAAAATGGTTGAGTCGGAAAGCTCTGATGATGAATATGATGAACCTGATTTACAAACTACATCATATGGTGAACCAGAAAATGATAATTTCAGCGAAGTTTTGCTAGGGATAAGGGGATCACGTGTGAGATACAAGGATCTGCGAAGTATGTTTGGTCCTGAGCAGCAGAGATACTTGGAGTCACAGTTGCAGAAATACAGGAGGGTTGTGGGTCCAGTGTTATCTGAGCGAATGGTCTACTCTCTTGGTTAA 1863 0.3994 MSSRMRNEASSSSKTPKESVVVDYGKHRSSCGYCRSPRHNSISHGMLAESLTVDDYQALLDQGWRRSGCFLYKPEMDKTCCPSYTIRLKASDFVPSKDQLRVSRRMQRFLDGTLDVKRVDVMKESNTSNSESLVHNNPSCSMSEESLSVANKGVAEDEKSLHDISEQIDNVTHMFTKNGEFPSDIQLPKASVRMVSQGKKKFLAKGPEDLLYSSNIAFQVAASINRAQSKDKDGSDSKPSRDSEKENGFSPKVIAEKLVASLDSIMKNSGLAIKACNGHVNFYASSKQVSQNGTVQNAAIPKKSGMKCQFKKRKLEIRLNRSSFDPEEHALFARYQSKVHNDKPANYTESSYRRFLVDTPLLYVSPTGDNTVPPCGFGSFHQQYLVDGQLVAVGVIDILPNCLSSKYLFWDPDFAFLSLGKYSALQEIGWVKDNQVYCPSLQYYYLGYYIHSCNKMRYKAAYRPSELLCPLRYQWVSFDIARPLLDRKRYVVLSDASILQHGESSPLQVSEDQDAMLIQLDDGDQEDANDVPMHEDEKMVESESSDDEYDEPDLQTTSYGEPENDNFSEVLLGIRGSRVRYKDLRSMFGPEQQRYLESQLQKYRRVVGPVLSERMVYSLG 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01840 620 Pfam Arginine-tRNA-protein transferase, C terminus 327 469 IPR007472 GO:0004057|GO:0016598
Tsu03g01840 620 PIRSF ATE1_euk 9 620 IPR017137 GO:0004057|GO:0016598
Tsu03g01840 620 PANTHER ARGININE-TRNA-PROTEIN TRANSFERASE 1 4 619 IPR030700 -
Tsu03g01840 620 MobiDBLite consensus disorder prediction 227 249 - -
Tsu03g01840 620 MobiDBLite consensus disorder prediction 524 565 - -
Tsu03g01840 620 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 314 482 IPR016181 -
Tsu03g01840 620 MobiDBLite consensus disorder prediction 1 22 - -
Tsu03g01840 620 MobiDBLite consensus disorder prediction 229 249 - -
Tsu03g01840 620 PANTHER ARGINYL-TRNA--PROTEIN TRANSFERASE 2 4 619 - -
Tsu03g01840 620 MobiDBLite consensus disorder prediction 1 18 - -
Tsu03g01840 620 Pfam Arginine-tRNA-protein transferase, N terminus 29 99 IPR007471 GO:0004057|GO:0016598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01840 K00685 - gmx:100780234 894.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01840 03 18938901 18944119 Tsu03g01840 03 18938901 18944119 ECH