Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01804 atggcATCTTCCCGTCCACCACCATCAAAATCAGTAGATCTCGACCTCACCATCATCTCCGCCAAACACCTCAAAAACGTCAACTGGAAAATCGGCGATCTCAAACCCTACGTCGTTTTCTGGCTCGATCCTGACCGTCGACTCGCCACCAAATCCGACGATTCCGGTAACACTTCCCCTGTCTGGAACGAACGTTTCACCCTCTCTCTTCCACTTCCTCTCCAAGACTCAACCCTCACTCTTGAGATCTTCCATTCCAAACCCTCCGATACTCCCAAACCCCTCGTCGCCACCCTCCGTCTTCCCCTTAAAGACCTTCCTGAACTCAATCACTCCACCGTCGTCCGGAAATTCCCCGTCGTTCGACCCTCCGGTCGTCCTCAAGGTAAAATTCACCTCAAAATTGGACTCCTCGGTCgctctcctcctcctcctccaccgCCACACGCCTTTGATTACCTCAATTTCAACCCTAGCTCCAACTATAACCCTAATCCTACTCCTAAtcctaaccctaaccctaatccTAGCTCTAATTCCAATCCTTCCTTTGTTTATTACAGAGGAGGATATTCCCCTGCACCTTCACCTTCTCCATCACCTTCACCTTACAATTCTTACACCTCCTACTCTGATTCTTACAATGGCGGTTACTATCCCGGGTTCTATTCACCAGGTACTGCTCCTTACCCTCCACCGCCTCCGAGGCCTTTTGTTGATCGTGCCACTAGCAGCAGTTATGCTGCTGCTGGGCCGAGTGGACCGTCTGCCCCGCTTGAATATTCCACCGCGGTTGATTCGAGGCCTAAAGGCGGTAAGATGGGGTTAGGTGCTGGGCTTGCTGTTGGTGCTGTTGCTGGGACACTGAGTGGAATTGCTCTTGAAGAAGGGATGAGGTATGAAGAACGCAAACTTGCGGAAATGGTTGAAAGTGATGCTGCTTCTGCTAGAGATGATTATGGAGACGGACATTACCGAGATTATTGA 987 0.4792 MASSRPPPSKSVDLDLTIISAKHLKNVNWKIGDLKPYVVFWLDPDRRLATKSDDSGNTSPVWNERFTLSLPLPLQDSTLTLEIFHSKPSDTPKPLVATLRLPLKDLPELNHSTVVRKFPVVRPSGRPQGKIHLKIGLLGRSPPPPPPPHAFDYLNFNPSSNYNPNPTPNPNPNPNPSSNSNPSFVYYRGGYSPAPSPSPSPSPYNSYTSYSDSYNGGYYPGFYSPGTAPYPPPPPRPFVDRATSSSYAAAGPSGPSAPLEYSTAVDSRPKGGKMGLGAGLAVGAVAGTLSGIALEEGMRYEERKLAEMVESDAASARDDYGDGHYRDY 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01804 328 PANTHER INGRESSION PROTEIN FIC1 8 323 - -
Tsu03g01804 328 MobiDBLite consensus disorder prediction 308 328 - -
Tsu03g01804 328 SMART C2_3c 13 115 IPR000008 -
Tsu03g01804 328 MobiDBLite consensus disorder prediction 231 265 - -
Tsu03g01804 328 MobiDBLite consensus disorder prediction 163 177 - -
Tsu03g01804 328 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 142 IPR035892 -
Tsu03g01804 328 CDD C2_SRC2_like 13 133 IPR044750 GO:0006952
Tsu03g01804 328 ProSiteProfiles C2 domain profile. 1 116 IPR000008 -
Tsu03g01804 328 Pfam C2 domain 13 108 IPR000008 -
Tsu03g01804 328 MobiDBLite consensus disorder prediction 135 204 - -
Tsu03g01804 328 PANTHER C2 DOMAIN-CONTAINING PROTEIN-LIKE 8 323 - -
Tsu03g01804 328 Gene3D C2 domain 3 138 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01804 Tsu-Chr3 18586012 18587511 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01804 - - cam:101506439 360.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01804 03 18586012 18587511 Tsu03g01804 03 18586012 18587511 ECH