Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01794 ATGGAAACTGGTATAGCATGTTACTCCCGTGGTGCTTTTCTTCCTACTGTTTCTTCCAAATCCAAACACTCCCTACCCTCTATCACTCCCTCTTCTACCTTCAGGAATTTGAAAACAAGCTCTTTCTTTGGAGAATCAGTTAGAGTGTCATCCAAATCAACACTGAAGTTATCAAGAACAAAAGCTACTTCATTAATAACCAAATGTGAAATTGGTGACAGTTTGGAAGAATTCCTGTCAAAGGCGACACCGGATAAGGGGCTGATTAGGTTGTTGGTGTGCATGGGAGAAGCATTAAGAACAATTGCTTTCAAAGTGAAGACAGCTTCTTGTGGTGGAACACAATGTGTTAATTCTTTTGGGGATGAGCAGCTTGCAGTGGATATGTTGGCTAACAACCTTCTTTTTGAGGCCTTAAAACATTCCCACTTTTGCAAGTATGCATGCTCAGAAGAAATCCCTGAGCTTCAAGACATGGGAGGTCCAGTTGAAGGTGGATTTAGTGTTGCATTTGATCCTCTTGATGGTTCCAGCATAGTAGATACAAATTTCACAGTTGGCACAATCTTTGGTGTGTGGCCTGGTGATAAGTTGATTGGAGTTACTGGAGCAGATCAAGTTGCGGCGGCTATGGGAGTTTTAGGTCCTAGAACTACTTATGTGCTTGCTGTTAAAGGCTTCCCTGGTACTCATGAATTTCTCCTTCTTGACGAAGGAAAATGGCAGCATGTCAAAGAGACTCATGAAATTGGTGAAGGAAAACTATTCTCCCCTGGAAATTTGAGAGCTACATTTGACAACACCAATTATGCCAAGTTGGTTGATTACTATGTCAGAGAAAAATACACATTGAGATACACTGGAGGAATGGTGCCAGATGTCAACCAGATTATTGTAAAAGAAAAGGGCATATTTACAAATGTGACATCACCAACTGCAAAAGCCAAGTTGAGACTGTTGTTTGAGGTAGCTCCTTTAGGACTATTGATTGAAAATGCTGGAGGTTACAGCAGTGATGGTTATAAATCAGTGCTAGACAAGGTCATTGAAAACATTGATGATAGAACTCAAGTTGCTTATGGATCAAAGAATGAGATCATTAGGTTTGAAGAAACATTGTATGGTTCATCAAGGCTCAAGGGTGGTGTACCTGTTGGAGCATCTGCTTAA 1170 0.4077 METGIACYSRGAFLPTVSSKSKHSLPSITPSSTFRNLKTSSFFGESVRVSSKSTLKLSRTKATSLITKCEIGDSLEEFLSKATPDKGLIRLLVCMGEALRTIAFKVKTASCGGTQCVNSFGDEQLAVDMLANNLLFEALKHSHFCKYACSEEIPELQDMGGPVEGGFSVAFDPLDGSSIVDTNFTVGTIFGVWPGDKLIGVTGADQVAAAMGVLGPRTTYVLAVKGFPGTHEFLLLDEGKWQHVKETHEIGEGKLFSPGNLRATFDNTNYAKLVDYYVREKYTLRYTGGMVPDVNQIIVKEKGIFTNVTSPTAKAKLRLLFEVAPLGLLIENAGGYSSDGYKSVLDKVIENIDDRTQVAYGSKNEIIRFEETLYGSSRLKGGVPVGASA 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01794 389 CDD FBPase 71 373 IPR000146 GO:0005975|GO:0016791
Tsu03g01794 389 PANTHER SEDOHEPTULOSE-1,7-BISPHOSPHATASE, CHLOROPLASTIC 74 376 - -
Tsu03g01794 389 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 252 372 IPR044015 -
Tsu03g01794 389 Gene3D - 70 246 - -
Tsu03g01794 389 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 74 376 IPR000146 GO:0005975|GO:0016791
Tsu03g01794 389 SUPERFAMILY Carbohydrate phosphatase 68 372 - -
Tsu03g01794 389 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 66 246 IPR033391 -
Tsu03g01794 389 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 124 139 IPR023079 GO:0005975|GO:0016791
Tsu03g01794 389 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 140 160 IPR023079 GO:0005975|GO:0016791
Tsu03g01794 389 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 200 218 IPR023079 GO:0005975|GO:0016791
Tsu03g01794 389 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 254 270 IPR023079 GO:0005975|GO:0016791
Tsu03g01794 389 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 284 304 IPR023079 GO:0005975|GO:0016791
Tsu03g01794 389 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 346 370 IPR023079 GO:0005975|GO:0016791
Tsu03g01794 389 Gene3D - 247 387 - -
Tsu03g01794 389 ProSitePatterns Fructose-1-6-bisphosphatase active site. 315 327 IPR020548 GO:0005975|GO:0042578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01794 K01100 - gmx:100786122 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01794 03 18426606 18429536 Tsu03g01794 03 18426606 18429536 ECH