Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01786 ATGTCTTGTTCGCCTGCAAAAGCTAATTGGAACCCTGCATTCCATAAATTGTTTGTCGGGTTATGTCTCCGAGAAGTGTTGAAGGTGAATGAGCCTGGGGCACGACTTACCAAGGAGGCTTGGAAGAACATTGTTGAATCTTTTTATGTAAAGACTGGCGTGGAATACGACAAAAAACAATTCAAGAATCACTATGATTCCACCAGGAAACTATGGAAGGTCTGGGATAAGCTGGCTCGTGATAGTAGCATGAAATGGGAtccaaaaactaaaaagtttgGTGCTTCTGAAGAAGACTGGTGCGATTATATAAAAgAAAACCCAGAAGCTGCACAGTTTCAGTCTAAGGAAATTCAGTTTAAAGATGAATTGGATATCATCTTCGATGCAGAAATGCCTCCTGAGGAGATTAAAAACTCAATACGTGTTAAGTGGCAGGATAATGCTTCAGGCAAATCTTCTTTGCATGGAAGAGGGCGCGGGAGGAAGCGCAAGTGTGTTGTTAGGGATGAAGAATTAGATACTTCTGCTATGGTTAAATCTCCGCTATCTCCAAAAGCCTCATGGACACCTGCATTCcataaaatatttgttgattTATGCCTTGACGAAACTTTGAAGGGGAACAAGGCCGGGACACATTTTACCAAGGAGGGCTGGAGGAATATTATGGGATACTTTCATGCAAAGACTGGTGTGAGATATGACAAAAGACAAATTAAGAATCACTATGATTCAACCAGAAAACAATGGAAAATATGGGTTAAGTTGATTGGCGATGATATCATGAAATGGGACCCAGAAACCAATACGTTTGGTGCTTCAGAGAAAGAATGGGTCAATTATCTAAAGGCGAACCCAGAAGCTGCACAATTCCGCCTTAAGGAAATCCCATTATCGGACAAATTGGATATCATCTTTGGTGATAGTATACAATCTGGGGAAATGAAACCTTCAACTAGTAGTGAGAGACAGAATGATGATTCAGCAGCTACTACATCTCCTTTATCTGAAGAGCGAGGAAAGAAACATAAGAGCGTTAATGAGGATTTTGACTTTAAGAGTGCTATTTTGGTTAATGCTACACCGATCAGTGCAATTGCGAGTGAGCAAAGCATATCATGCTCATCATTTGCTAAGGTCAAAGCCAACTGGACCCCTTCATTGCACAAGACCTTTATTGATCTATGTTGGAAGAATATTATGGATTCATTTCATTTGCAATCTGGTTTGACTTATGGCAGATTACAATTTAAGAATCACTGGGATAATACAAAGGAACAATGGAGGATTTGGTCTAAGCTTGTTTCCACTAGTTATATGAAATGGAATCCATATAAGCATACATTTGAGGCTAGTGAAGAAGATTGGAAGAAATATTTAAAAGCAAACCCAGAAGCTGCCCCATTTCGCTATAAGGAACTACAATTCACCGACGCATTGGATACCATCTTTAATGGTACTACTGTTACTGGGGAGACTGTACCTGCTCTGAAACAAAGGAAAAGCGATGACAGTGTTAATACTTTGCCTTTGCACGTAAAAGAACCAGATGTAACCAGCTCGGATGAGAagactgaatatctttgtgaTGCTGTTGCATCAAGAAATGGTACAAGCATTCAAAAGAATGCCATTGCAATTTCTTCTGCTGAAGGCAAACGTAATTATAGTATCGGTGAATGTATTGAATGCCTTGATGGAATGGAAgaattagagcaaggaagtgaCCTCTATTTGTTTGCTTTAGATGTGTTCCTTAGGCCGGAACATAGGGAAATTTTTCTCCAGTTGAAAAAGCCTAATCTGAGGATCTCATGGTTGCAGCGGCTTCAGTCTGTTGGTCAATCTTCAGTCTAG 1860 0.3871 MSCSPAKANWNPAFHKLFVGLCLREVLKVNEPGARLTKEAWKNIVESFYVKTGVEYDKKQFKNHYDSTRKLWKVWDKLARDSSMKWDPKTKKFGASEEDWCDYIKENPEAAQFQSKEIQFKDELDIIFDAEMPPEEIKNSIRVKWQDNASGKSSLHGRGRGRKRKCVVRDEELDTSAMVKSPLSPKASWTPAFHKIFVDLCLDETLKGNKAGTHFTKEGWRNIMGYFHAKTGVRYDKRQIKNHYDSTRKQWKIWVKLIGDDIMKWDPETNTFGASEKEWVNYLKANPEAAQFRLKEIPLSDKLDIIFGDSIQSGEMKPSTSSERQNDDSAATTSPLSEERGKKHKSVNEDFDFKSAILVNATPISAIASEQSISCSSFAKVKANWTPSLHKTFIDLCWKNIMDSFHLQSGLTYGRLQFKNHWDNTKEQWRIWSKLVSTSYMKWNPYKHTFEASEEDWKKYLKANPEAAPFRYKELQFTDALDTIFNGTTVTGETVPALKQRKSDDSVNTLPLHVKEPDVTSSDEKTEYLCDAVASRNGTSIQKNAIAISSAEGKRNYSIGECIECLDGMEELEQGSDLYLFALDVFLRPEHREIFLQLKKPNLRISWLQRLQSVGQSSV 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01786 619 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 339 397 IPR045026 -
Tsu03g01786 619 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 398 618 IPR045026 -
Tsu03g01786 619 Pfam Myb/SANT-like DNA-binding domain 188 282 IPR024752 -
Tsu03g01786 619 Pfam Myb/SANT-like DNA-binding domain 381 460 IPR024752 -
Tsu03g01786 619 Pfam Myb/SANT-like DNA-binding domain 9 103 IPR024752 -
Tsu03g01786 619 MobiDBLite consensus disorder prediction 313 345 - -
Tsu03g01786 619 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 184 349 - -
Tsu03g01786 619 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 398 618 - -
Tsu03g01786 619 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 6 154 IPR045026 -
Tsu03g01786 619 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 6 154 - -
Tsu03g01786 619 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 184 349 IPR045026 -
Tsu03g01786 619 MobiDBLite consensus disorder prediction 313 336 - -
Tsu03g01786 619 PANTHER L10-INTERACTING MYB DOMAIN-CONTAINING PROTEIN 339 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01786 Tsu-Chr3 18339817 18342162 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01786 - - mtr:MTR_3g070080 1027.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01786 03 18339817 18342162 Tsu03g01786 03 18339817 18342162 ECH