Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01777 ATGAAGAATAGATTCATTGTTCTTGTTCCATTGAAACATAGCACCATGGTTCAATTcaccattttcatcttttttaccTTAATCCTCTTCATacaaccttcttcttcttcagattcttTTTCTAATAACCCAAATTTCGACTCTGACATTGATCTCTTCGGTGATGCAAAGATTCTCGCCGATCATTCCGGTAATGGAACCCACGTTAAACTCACCCACAAATCTTCTCTCACCGCCGGTCTTCTCCTCCGTCATAACCCCATCACATTCTCAAACCTCACATCCTTCAATGTAGAATTTACTTTCTCAATTTCCTCCGATGCCGGAGACGGTCTTCTCTTCATTCTAATCCCTCGTGATCTTGCTGCTGCATTCCCTGGTAATGGCTCATACGGTCTTGATCATCCTTCTTCTCCGATGAATAGTTACCTCGGCGTTGAATTTGATACGTCCAAAGATGACAATGTTAATGATATGAATGAGAATCATGTTGGCATTGACGTTGGAAGCCTTATATCTGTCGCTGTTGCCAATGCTTCGGCTTCCAATTTGGTTCTTAATAATGGTGAAAAGTTGAAATCTTGGATTGATTATGATGCTGGGTCAAAATTATTGGAAGTTAGGTTAAGtaaattgaatgaaaataaaTCTGAAAATCCAATTGTTTCacataatattgatttgtttaagATTTGGGGTGATCAATCTGTTTTTATGGGTTTGAGTTCTTCAAATGATGCTAATTCTGTTCAAGTTGTTCGTGTTTATTCATGGAAggttattttgaaaaatgttacaTTGAAAAATGATACATTGAAAAATGTTACAGTTTCAAACTCGCCGCATTCTCAACCTGTTAATCCTAATgaagatcaacaacaacagcaacaaaaacaacaacaagaaaaagaaaaagaagcaaaGGTTGATGCCGTGGTCGcgaaaaaaaagaagcaaaatccTTTGACATTTCTAGCTGGTGTCATTTTTGGAACAGTTTGTGTTGTGTTGGTGACATTTGTGATATTGTTTATGTGGGTGATTTTCTTTCATAAACATGAAGAAGAGTCTCTTGCTAAATTACCAGAAAATCCTTCTGATGTAAGATATGAAAGGATTGATGTTGCTGTTGATAAGAATGCTGAAGATCatgatgaacaacaacaacattag 1173 0.3146 MKNRFIVLVPLKHSTMVQFTIFIFFTLILFIQPSSSSDSFSNNPNFDSDIDLFGDAKILADHSGNGTHVKLTHKSSLTAGLLLRHNPITFSNLTSFNVEFTFSISSDAGDGLLFILIPRDLAAAFPGNGSYGLDHPSSPMNSYLGVEFDTSKDDNVNDMNENHVGIDVGSLISVAVANASASNLVLNNGEKLKSWIDYDAGSKLLEVRLSKLNENKSENPIVSHNIDLFKIWGDQSVFMGLSSSNDANSVQVVRVYSWKVILKNVTLKNDTLKNVTVSNSPHSQPVNPNEDQQQQQQKQQQEKEKEAKVDAVVAKKKKQNPLTFLAGVIFGTVCVVLVTFVILFMWVIFFHKHEEESLAKLPENPSDVRYERIDVAVDKNAEDHDEQQQH 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01777 390 PANTHER LEGUME LECTIN BETA DOMAIN PROTEIN 13 384 - -
Tsu03g01777 390 MobiDBLite consensus disorder prediction 276 296 - -
Tsu03g01777 390 Coils Coil 289 309 - -
Tsu03g01777 390 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 13 384 - -
Tsu03g01777 390 Gene3D - 34 267 - -
Tsu03g01777 390 MobiDBLite consensus disorder prediction 276 307 - -
Tsu03g01777 390 SUPERFAMILY Concanavalin A-like lectins/glucanases 39 259 IPR013320 -
Tsu03g01777 390 CDD lectin_legume_LecRK_Arcelin_ConA 42 258 IPR001220 GO:0030246
Tsu03g01777 390 Pfam Legume lectin domain 39 260 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01777 Tsu-Chr3 18267694 18268866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01777 21 286 Receptor kinase-like Gene Family AT5G55830 33.218 2.62e-23 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01777 - - lang:109329156 350.517
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01777 03 18267694 18268866 Tsu03g01777 03 18267694 18268866 ECH