Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01747 ATGGAGAACAACGCCGACTCTTGTAGAGATTTCGTCAAAGATGTTAAACGCATAATCATCAaggtTGGAACTGCTGTTGTTACTCGTCAAGATGGTAGATTAGCTGTTGGAAAATTAGGGGCACTCTGTGAGCAGATTAAGGAGCTGAACATTCTAGGTTATGAAGTTATTTTGGTTTCATCCGGTGCTGTTGGCCTTGGTCGCCAAAGGCTTAGATATAGGAAATTGATTCACAGTAGTTTTGCTGACCTTCAGAAGCCACAAGTTGAACTTGATGGCAAAGCTTGTGCTGCTGTTGGACAAAGCAGTCTTATGGCTACTTATGATGATTTGTTTAGTCAGCTTGATGTGACGTCTGCTCAGCTTCTTGTTACTGACAACGATTTTAGAGACAAAGATTTTAGAaagcaactttctgaaactgtCAAGTCGCTTCTAGCATTAAAAGTTATTCCAATATTCAATGAGAACGATGCAGTCAGTACTAGGAAAGCTCCATACGAGGACTCTTCTGGCATATTTTGGGATAATGACAGTTTATCGGCTTTGTTGGCCTTGGAATTAAAAGCAGATCTTCTTATTTTGTTGAGTGATGTAGATGGTCTTTATAACGGCCCTCCAAGTGATCCACATTCAAAGCTTATTCACACATACATCAAGGAAAAGCATCAAAATGAAATTACTTTTGGAGACAAGTCTAGGGTTGGAAGAGGTGGAATGACGGCCAAAGTAAAAGCATCTGTTCATGCAGCGGATGCTGGCATTCCTGTTATCATTACAAGTGGTAATGCAGCTGAAAATCTCACTAAAATCCTCCAAGGACAACGTATTGGTACCCTCTTCCATAAAGATGCGCATAAATGGGTCCCATCAAAGGAGGTTGATGTACGCGAGATGGCAGTTGCAGCTAGGGACTGTTCCAGACGGCTTCAGGCCGTATCTTCGGAAGAAAGGAAACAAATTTTGCTAAATATAGCCGATGCCTTAGAATCGCGTCAGAAAGAGAtcaagattgaaaatgaagctGATGTTGCTGCTGCACAAGAAGCAGGATATGAAAAATCCTTAGTTGCTAGGCTGATTGCAGGCCTTGCCAACAACATACGAATTATTGCAAACATGGAAGATCCTATTGGTCGAGTGTTAAAACGAACTGAGCTTGCAGAGGGGCTAATTTTGGAGAAAACATCATCTCCTTTGGGAGTTCTTTTAATTGTTTTCGAGTCTCGCCCTGATGCACTAGTACAGATAGCTTCCTTGGCAATTAGAAGTGGGAATGGACTTCTTTTGAAAGGAGGCAAGGAGGCTAAGCGATCAAATGCAATTTTGCACAAAGTGATTACCGAAGCTATACCAGATACTGTTGGCTCAAAACTTATTGGACTTGTGACAACAAGAGCAGAAATACCTGAACTACTTAAGCTGGATGATGTAATTGATCTGGTGATTCCAAGAGGCAGCAACAAACTTGTTTCCGATATCAAGAGTTCCACGAAAATCCCTGTTCTTGGTCATGCTGATGGAATTTGCCACGTCTATGTTGATAAATCTGCTAATTTGGAGATGGCAAGACAGATTGTACTTGATGCAAAAACAGATTATCCAGCAGGCTGTAATGCCATGGAAACACTTCTTGTTCATAAGGATTTGGTAGAGAAAGGCTGGCTCAATAGTATTACTGTCGACTTGCGGTCAGAAGGTGTTACATTATATGGAGGACAGAAAGCAAGTTCTCTGTTAAATATTCCACTTGCTCGTTCACTACATCACGAGTACTGTTCGTTGGCTTGCACTGTTGAAATCGTGGATGATGTTTATGCAGCTATTGATCATATAAATCTTTACGGAAGGCATAGATTACAGCTCATTGTAAAGTGGCATTTAAATGCGAATAATGTTTGTTATATTGGTAGTGCTGCTGTTTTTCACAATGCTAGTACAAGATTCAGCGATGGTGCACGATTTGGACTAGGCGCAGAGGTTGGAATAAGTACAAGCCGGATTCATGCTCGGGGTCCAGTAGGAGTTGATGGATTGTTAACAACCAGATGGATTCTCAAAGGAAGTGGACAAGTAGTAGATGGTGATAAAGCAGTTAGCTACACTCACAGAGACCTAACTACTACTTGA 2130 0.4056 MENNADSCRDFVKDVKRIIIKVGTAVVTRQDGRLAVGKLGALCEQIKELNILGYEVILVSSGAVGLGRQRLRYRKLIHSSFADLQKPQVELDGKACAAVGQSSLMATYDDLFSQLDVTSAQLLVTDNDFRDKDFRKQLSETVKSLLALKVIPIFNENDAVSTRKAPYEDSSGIFWDNDSLSALLALELKADLLILLSDVDGLYNGPPSDPHSKLIHTYIKEKHQNEITFGDKSRVGRGGMTAKVKASVHAADAGIPVIITSGNAAENLTKILQGQRIGTLFHKDAHKWVPSKEVDVREMAVAARDCSRRLQAVSSEERKQILLNIADALESRQKEIKIENEADVAAAQEAGYEKSLVARLIAGLANNIRIIANMEDPIGRVLKRTELAEGLILEKTSSPLGVLLIVFESRPDALVQIASLAIRSGNGLLLKGGKEAKRSNAILHKVITEAIPDTVGSKLIGLVTTRAEIPELLKLDDVIDLVIPRGSNKLVSDIKSSTKIPVLGHADGICHVYVDKSANLEMARQIVLDAKTDYPAGCNAMETLLVHKDLVEKGWLNSITVDLRSEGVTLYGGQKASSLLNIPLARSLHHEYCSLACTVEIVDDVYAAIDHINLYGRHRLQLIVKWHLNANNVCYIGSAAVFHNASTRFSDGARFGLGAEVGISTSRIHARGPVGVDGLLTTRWILKGSGQVVDGDKAVSYTHRDLTTT 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01747 709 PANTHER DELTA-1-PYRROLINE-5-CARBOXYLATE SYNTHASE 4 708 - -
Tsu03g01747 709 ProSitePatterns Glutamate 5-kinase signature. 233 250 IPR019797 GO:0004349|GO:0006561
Tsu03g01747 709 Hamap Gamma-glutamyl phosphate reductase [proA]. 295 693 IPR000965 GO:0004350|GO:0006561
Tsu03g01747 709 SUPERFAMILY Carbamate kinase-like 16 281 IPR036393 -
Tsu03g01747 709 PANTHER GLUTAMATE SEMIALDEHYDE DEHYDROGENASE 4 708 - -
Tsu03g01747 709 PIRSF P5C_synthetase 1 709 IPR005766 GO:0003824|GO:0006561
Tsu03g01747 709 Hamap Glutamate 5-kinase [proB]. 16 292 IPR005715 GO:0005737|GO:0006561
Tsu03g01747 709 TIGRFAM proB: glutamate 5-kinase 16 287 IPR005715 GO:0005737|GO:0006561
Tsu03g01747 709 Pfam Amino acid kinase family 16 261 IPR001048 -
Tsu03g01747 709 SUPERFAMILY ALDH-like 295 692 IPR016161 GO:0016491
Tsu03g01747 709 CDD ALDH_F18-19_ProA-GPR 297 689 IPR000965 GO:0004350|GO:0006561
Tsu03g01747 709 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 305 691 IPR016162 GO:0016491
Tsu03g01747 709 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 507 651 IPR016163 GO:0016620
Tsu03g01747 709 TIGRFAM proA: glutamate-5-semialdehyde dehydrogenase 303 682 IPR000965 GO:0004350|GO:0006561
Tsu03g01747 709 Pfam Aldehyde dehydrogenase family 292 553 IPR015590 GO:0016491
Tsu03g01747 709 TIGRFAM P5CS: delta l-pyrroline-5-carboxylate synthetase 9 707 IPR005766 GO:0003824|GO:0006561
Tsu03g01747 709 Gene3D - 5 289 IPR036393 -
Tsu03g01747 709 PRINTS Glutamate 5-kinase family signature 235 255 IPR001057 GO:0005524|GO:0016301
Tsu03g01747 709 PRINTS Glutamate 5-kinase family signature 97 125 IPR001057 GO:0005524|GO:0016301
Tsu03g01747 709 PRINTS Glutamate 5-kinase family signature 176 203 IPR001057 GO:0005524|GO:0016301
Tsu03g01747 709 PRINTS Glutamate 5-kinase family signature 137 158 IPR001057 GO:0005524|GO:0016301
Tsu03g01747 709 PRINTS Glutamate 5-kinase family signature 53 67 IPR001057 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01747 Tsu-Chr3 17835970 17841573 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01747 K12657 - gmx:548058 1191.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01747 03 17835970 17841573 Tsu03g01747 03 17835970 17841573 ECH