Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01739 atgagTACACATAACATGTTGGGCATCGTTTTAAATGATATACTTCGGACGGTCACACCCTCACAAGAAGATTGGGAGATACGGCTTGCAATTATTAATGATTTGCGAAACACTGCTGAATCTGTGGAAAACCTGAGAGGAGCAATTGTTGAACCATTTGGGTCATTTGTGTCTAATCTCTTCACGCGATGGGGTGACTTGGATATTTCAATTGAATTATTAAATGGTTCCCACATTGGATCTGCTGggagaaaacaaaaacaaacattgCTCGAAAAGTTTCTACAAGCTTTGAGAATGAGAGGTGGATGCATGAACTATCAACTCATCCCAAATGCAAGAgttcctattttaaaattcaaaagaaaaggcATATCTTGTGATGTTTCAATCAATAACCTGCCGGGCCTAATGAAATCCAAATTTTTGCTTTGGATCAACAAGATAGATGGTCGCTTTCATGATCTGGTTTTAGTGGTTAAGCAATGGGCAAAAGCACATAAAATCAATAATTCTAAGACCGGAAGTTTCAACTCCTTTACGCTCAGTTTACTTGTAATCTTTCACTTTCAGaCATGTGCTCCGGCAATTTTACCACCACTGAAAGATATATACCCTACCAATATGGTTGATGAGCTTAGAGGTGTTAGAGCTGATGCAGAGAATCTTATCGCACAAACCTGTGAGGCTAACATAAACAGGTTCATATCAAACAAGTCGAGGCCAATTAACAGAAAATCTTTACCTGAACTTTTTGTTGATTTCCTAAGAAAGTTTGTGCAGATAGATTCATGGGCGTCAGAGATCGGAATTTGCACTTATACTGGACAATGGGAACAGATAAAAGAAAACATGAGATGGTTGCCCAAGACTTGCGCAGTATTGGTTGAGGATCCTTTTGAGCAGCCGGAAAATTCAGCAAGATCTGTCAGCTCAGGACAACTGAAAAAGATAGCTGAAGCATTTCTAAAGACATTCAGCTTACTTACGTcacaaaatcagaaccaaagcTCTCTTCTGACCCAGTTAGCACCACCATATGTGTCGAGACTTATTATCGGACCTGTCATTCCAAATTATAATGTCAGGCCTGCCATTCCAAGTTACATTGGTGGTTACTCTCTTCCAACTCAGCCACAGCCACAGGTGCACAGGGGTCTACTCCCACACCCAAGGTCAGGGCATCGTTTTCAAAATGGCAAGCAAGGAGCATACTCCAACGGTTCGACTTCAAAGCAAGGGTCAAGCTCCAACGGTTCGATTTCAAAGCAACGACGTTACTCaaatggtacaacttcaaaGGGAGGTGCAAGCTCCAATGGTTCAACCTCAAAGCAAGAAGCAAGCTCCAATAGTTCAATTTCAACAGTACCTGCAAAAGCTCATCAAGTTCCGCCGCAGCAGCAGGCATGGAGGCCAAAGCTCCAAATCCAATAG 1437 0.3953 MSTHNMLGIVLNDILRTVTPSQEDWEIRLAIINDLRNTAESVENLRGAIVEPFGSFVSNLFTRWGDLDISIELLNGSHIGSAGRKQKQTLLEKFLQALRMRGGCMNYQLIPNARVPILKFKRKGISCDVSINNLPGLMKSKFLLWINKIDGRFHDLVLVVKQWAKAHKINNSKTGSFNSFTLSLLVIFHFQTCAPAILPPLKDIYPTNMVDELRGVRADAENLIAQTCEANINRFISNKSRPINRKSLPELFVDFLRKFVQIDSWASEIGICTYTGQWEQIKENMRWLPKTCAVLVEDPFEQPENSARSVSSGQLKKIAEAFLKTFSLLTSQNQNQSSLLTQLAPPYVSRLIIGPVIPNYNVRPAIPSYIGGYSLPTQPQPQVHRGLLPHPRSGHRFQNGKQGAYSNGSTSKQGSSSNGSISKQRRYSNGTTSKGGASSNGSTSKQEASSNSSISTVPAKAHQVPPQQQAWRPKLQIQ 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01739 478 Gene3D - 150 325 - -
Tsu03g01739 478 Gene3D Beta Polymerase, domain 2 31 149 IPR043519 -
Tsu03g01739 478 PANTHER POLY A POLYMERASE CID PAP -RELATED 1 454 - -
Tsu03g01739 478 CDD NT_PAP_TUTase 27 146 - -
Tsu03g01739 478 PANTHER PROTEIN HESO1 1 454 - -
Tsu03g01739 478 SUPERFAMILY PAP/OAS1 substrate-binding domain 152 335 - -
Tsu03g01739 478 SUPERFAMILY Nucleotidyltransferase 5 145 IPR043519 -
Tsu03g01739 478 MobiDBLite consensus disorder prediction 399 478 - -
Tsu03g01739 478 MobiDBLite consensus disorder prediction 377 478 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01739 - - ccaj:109788017 590.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01739 03 17740750 17748123 Tsu03g01739 03 17740750 17748123 ECH