Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01734 ATGGCTCTTTTTCTTAACGCTTCCTTGTCTTCCACTTCCAAACCTCATCACCACAATCTCTTCAAATCAAAACCTTCCTTTTCAACCATCTCAGCAACTCCTCTTCCTCTGTTTCTGGAACCTAATCTGAAGCAACAAGTCTCTCAAAAACTTACATTATCATTTGGTGCATCAGTTTCTAGTGCTACCCTTGTTGCTCTTCTATCTGCTTCTCTTTTCTTTGTTGATCCTGCACTAGCATTCAAGGGTGGAGGGCCATATGGTCAAGGGGTTACTAGGGGACAAGATCTTTCTGGGAAAGATTTCAGTGGCAAGACACTCATCAAGCAAGACTTCAAAacgTCCATACTGCGACAAGCCAATTTTAAAGGTGCAAATTTGTTAGGTGCTAGCTTCTTTGATGCTGATTTAACAGGTGCTGATCTTTCGGATGCTGATCTTAGAAGTGCAGACTTTTCCCTTGCAAATGTGACAAAGGTAAATTTGAGCAATGCTAATTTGGAAGGTGCACTTGTAACGGGAAATACAtcttttaagggatcaaatatTACAGGCGCTGATTTCACTGATGTACCACTAAGAGAAGATCAACGTGAATACCTCTGCAAAATTGCTGATGGAGTGAACTCAACAACTGGAAATGCTACACGCGATACATTGCTGTGCAATTAA 672 0.4003 MALFLNASLSSTSKPHHHNLFKSKPSFSTISATPLPLFLEPNLKQQVSQKLTLSFGASVSSATLVALLSASLFFVDPALAFKGGGPYGQGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGANLLGASFFDADLTGADLSDADLRSADFSLANVTKVNLSNANLEGALVTGNTSFKGSNITGADFTDVPLREDQREYLCKIADGVNSTTGNATRDTLLCN 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01734 223 Gene3D - 80 223 - -
Tsu03g01734 223 SUPERFAMILY Pentapeptide repeat-like 91 193 - -
Tsu03g01734 223 Pfam Pentapeptide repeats (8 copies) 115 153 IPR001646 -
Tsu03g01734 223 PANTHER THYLAKOID LUMENAL 15 KDA PROTEIN 1, CHLOROPLASTIC 22 223 IPR044213 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01734 - - gmx:100500352 323.939