Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01729 ATGAGTCAAGATCGGTTGGAACCTTGTCATGATCCTCTTAAATTAACAAGATTACCTTTTATACCAGAAAAAATAGGTGACATGGTTTCAATCTCAATAAGAGTTGGCCTACTTATCTGCCTTATAGCATCCATAACACTTGCTTTCCATTCAACATTCGCTAAACCAGACCGGCGGTTTCCATTACCAGAGCATTTACATGTTATACAGAATGTTTCAGTCATTCAAATTGACAATGAACCAACAAACATTTCACATATTGTATTCGGCATTGCCGGTTCATCGAACACGTGGCATAGCCGTAGCAACTACAGCAAACTTTGGTGGAATCCAGACACTTGCAGAGGTTTTGCTTGGCTCGACAAAAGACCGGGTGATTTTAAGTCGGACCATATGATAATTCCGTATAAAATCTCAAAAGGTTGGACCCGATTCAGACACGTGCACTCTGCATCCGCAGTTCGGATAGCGCGGATAGTTTACGAAAGCTTTAGACTTGGTCTGCCAAATGTAAGGTGGTTTGTAATGGGAGATGATGATACAGTGTTTTTTCCCGAGAATTTAGTTACTGTGTTGGGAAAATATGATCACAATCAATTGTATTATATTGGTGGAAATTCTGAGAGTGTGGAACAAGATTTGATGCATTGTTTTGATATGGCTTTTGGTGGTGGTGGAATTGCCATTAGTTATGCACTAGCAGTTAGACTAGCCCAAATTATGGATTCTTGTCTTCATAGATACTATTATTTTTATGGCTCTGATCAAAGAGTTTGGGCTTGTGTAAATGAATTAGGAGTACCTCTTACAAGAGAAAGGGGATTCCATCAGCTTGACATTAAAGGGAATCCTTATGGTCTTTTAGCCGCGCACCCTTTGGCACCACTCGTGTCACTCCATCACCTTGATCAATTGGACTCGTTGTTTCCTGACCAAAGTCAAATGCATTCATTGAGAAAGCTCATTAGTGCATACCACCTTGACCCTGCAAGGATAGTGCAGCAAAGTGTTTGTTATGATCATAGGCGTAAATGGTCGATATCTATTTCGTGGGGATACACAATACAAATCTATACATCGTTGGTGATAATAGCGGATTTGCAGATGCCATTTCAGACGTTTAAAACTTGGCGAAGTTCGAGTGATGGTCCTTTCACGTTTAATACTCGATGGCTGAACCCTGACGAATGCCAGCAGCCGTCTATATTTTTCCTGGATCAGGTTAGAAAGGTGGGCTCTGGAAGTGTCACTACCTATAAGAGATATTATGGCAAGGAAGGAAAGAACTGCAAGAGAGCAGATGGAGAAGTGCAGAGAATTAAAGTTTCAGTCTTGAAACTGGATTCAGAATATTGGCAGAATGTACCACGTAGGCAATGCTGCCAAATTATGAATGGTGGAAGCATAAAAGATGGAAATGTGCATATCAGAATTAGGAAGTGCAGAGCTCAAGAAACAATTACTATTTAG 1470 0.4054 MSQDRLEPCHDPLKLTRLPFIPEKIGDMVSISIRVGLLICLIASITLAFHSTFAKPDRRFPLPEHLHVIQNVSVIQIDNEPTNISHIVFGIAGSSNTWHSRSNYSKLWWNPDTCRGFAWLDKRPGDFKSDHMIIPYKISKGWTRFRHVHSASAVRIARIVYESFRLGLPNVRWFVMGDDDTVFFPENLVTVLGKYDHNQLYYIGGNSESVEQDLMHCFDMAFGGGGIAISYALAVRLAQIMDSCLHRYYYFYGSDQRVWACVNELGVPLTRERGFHQLDIKGNPYGLLAAHPLAPLVSLHHLDQLDSLFPDQSQMHSLRKLISAYHLDPARIVQQSVCYDHRRKWSISISWGYTIQIYTSLVIIADLQMPFQTFKTWRSSSDGPFTFNTRWLNPDECQQPSIFFLDQVRKVGSGSVTTYKRYYGKEGKNCKRADGEVQRIKVSVLKLDSEYWQNVPRRQCCQIMNGGSIKDGNVHIRIRKCRAQETITI 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01729 489 Gene3D - 75 337 - -
Tsu03g01729 489 PANTHER FRINGE-RELATED 10 487 - -
Tsu03g01729 489 PANTHER BNAA05G27650D PROTEIN 10 487 - -
Tsu03g01729 489 Pfam Protein of unknown function, DUF604 212 461 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01729 Tsu-Chr3 17648046 17653549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01729 10 487 Glycosyltransferase AT3G11420 53.815 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01729 - - gmx:100802549 765.763