Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01715 atgactactttcttaattttcttCTGCTTTCTACTCTCCACTTCTGTCACAGCAGCCACAGGTGTTAATGTTACAAATGGGAATGGGATACAACTCATACTGGTAAACAACTGCAAAGAGAGTGTATGGCCAGGAATTCTCAGCAACGGCGAACACCCTACAATCAAAGACGGCGGATTCCATCTCCCAAGCGGCGAAGAACATGTTCTCCAAGTACCTAACCAATGGGCAGGTAGAATCTGGGGTAGACAAGGCTGTTATTTCAACGAAACAACCGGAAAAGGCTCGTGTCAAACCGGAGACTGCGGTGGCAAATTAGAATGCAAGGGAATTGGTGGTGTACCTCCAGCTACACTAGTTGAAATGACATTTGGAACCTCACAATCACCTTTACATTACTATGATGTTAGTTTAGTTGACGGTTTTAACCTTCCAATTTCAATGAAACCTATTGGTGGTAGTGTTGGTTGTGGCATTGCATCTTGTCAAGCTGATTTGAATGGTTGTTGTCCATCTTCACTTGTTGTGAAACATGATGGAAAAGTTGTAGGTTGCAAAAGTGCTTGTTTGGCTACAAAATCAGATAAGTATTGTTGCACTGGTGAATTTGCTGATCCAAAAATTTGCAAACCAACTATGTTTGCTCTTGTTTTTAAGAGTGTTTGTCCTCATGCTTATAGCTATGCTTATGATGATTCAACTGGGCTTATGAGGTGTTTGGCAACTAGATATGTCATTACATTTTGTCCTCCTCCATGA 759 0.4058 MTTFLIFFCFLLSTSVTAATGVNVTNGNGIQLILVNNCKESVWPGILSNGEHPTIKDGGFHLPSGEEHVLQVPNQWAGRIWGRQGCYFNETTGKGSCQTGDCGGKLECKGIGGVPPATLVEMTFGTSQSPLHYYDVSLVDGFNLPISMKPIGGSVGCGIASCQADLNGCCPSSLVVKHDGKVVGCKSACLATKSDKYCCTGEFADPKICKPTMFALVFKSVCPHAYSYAYDDSTGLMRCLATRYVITFCPPP 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01715 252 PRINTS Pathogenesis-related protein signature 31 43 IPR001938 -
Tsu03g01715 252 PRINTS Pathogenesis-related protein signature 79 90 IPR001938 -
Tsu03g01715 252 PRINTS Pathogenesis-related protein signature 240 249 IPR001938 -
Tsu03g01715 252 PRINTS Pathogenesis-related protein signature 132 148 IPR001938 -
Tsu03g01715 252 PIRSF PR5 3 252 IPR001938 -
Tsu03g01715 252 CDD TLP-PA 31 249 - -
Tsu03g01715 252 ProSiteProfiles Thaumatin family profile. 32 250 IPR001938 -
Tsu03g01715 252 PANTHER PATHOGENESIS-RELATED THAUMATIN FAMILY PROTEIN 3 251 - -
Tsu03g01715 252 SMART tha2 32 250 IPR001938 -
Tsu03g01715 252 ProSitePatterns Thaumatin family signature. 93 108 IPR017949 -
Tsu03g01715 252 Gene3D Thaumatin 31 250 IPR037176 -
Tsu03g01715 252 PANTHER OS03G0233200 PROTEIN 3 251 IPR001938 -
Tsu03g01715 252 Pfam Thaumatin family 36 250 IPR001938 -
Tsu03g01715 252 SUPERFAMILY Osmotin, thaumatin-like protein 31 251 IPR037176 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01715 Tsu-Chr3 17525856 17526945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01715 31 250 Receptor kinase-like Gene Family AT5G38280 40.969 2.05e-51 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01715 - - fve:101291104 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01715 03 17525856 17526945 Tsu03g01715 03 17525856 17526945 ECH