Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01708 ATGGTGCAGAAACGTCCTTTTGATGCTGCTGAGGAAATGCTTGAGGTGTCCTTCAAACACCCTAAACATGCAGGCTCCAGTGACATTCTTGTACCGTTATCAGAATCTGTTATTCCTGATGATGATCACTACACCCATTTGCCTAAAACTTCAGAGGAAGAATATGCACAAGGTAATAGCGATTGTAACGAAAAGCTTGCTGGTGAAAGTTGTGATGGACTTCCTAGAGGGGCTGGGAACTCTGAACCAAGCTTACCTGTGATAGGTATTCCTGCATCTTCTTGGGCTACCAGTCGCCCCATCGAAGAAGATCACCAATCAGAACAACCTATACATCTTCCTCTTTTTCCTGAGTACTTCAGTCCAGAACGGCCAATATATTTCAGTCCAGAACGACCCATAAGGACATTTACTCGCTATGAGGACCTCTATTCCATACTTCTGGAACACTCTCCTCGCAAGCCTGTATCAGTCGGAGCTGATCATCAAGCTGATGTTCCCCCATGGGGGTTTTCTGGTCCTACTGTTTGGGATGGGGATGAAGCCGAAAAGAGATTGATGGGGACCTGTATAATCCCTATGCCTGAGATGGAGTTATCTAGCATTGATGATGAAGTTGGAATGGGAAGAACTGATTGTAGCTGTGTAGACAGGGGATCTATGAGATGTGTAAGACAACATATaatggaagaaagaaagaaattgttaaAAACATTTGGGATTGAGAAATTCATTGAATTAGGGTTTGCTGGCATGGGAGAACAAGTGGCTGAAAAGTGGACTCCTGAGGATGAAAATCTATTTCACAAGGTTATCTTCAATAATCCAGCATCCCTCAACAAGAATTTCTGGAACTATCTTTCCATTGTGTTCCCCTCTCGAAGCAAAAAGGAGATAGTGAGTTACTACTTTAATGTCTTCATGCTACGAAAGCGGGCAGAGCAGAACAGGAACCATCTATTAAATGCTGATAGTGATAATGATGAATGGCAAGGTAGTGATGACAATGAAATTTCTACCCATGATGAAGATGAGGACTCTGTTGCTGAATATCCCATCTATCAAGATGATACTAACTGCAATGATAATCATATGGAGGATTATGATGATGAGTTTGGTGAAGATGAAACTTGCGCTGTTAATGGGACTGTAGATCATACCAAGAGGAACTTTGATGATGATTCTAAGTATGATCATGTGGAGATGCATCACTCTTCCCCTCCTCTGAATCAACCCCAGGATCAATCTGTTTGGCAGGATTCATGCGATGAAAAAGTGAAACATGATCCATACACATCACATGACATGGGAGTTGCTTCAAGGGAAATCAAGGTGAAGAGTGGGAATGGTGATAATTGGTGCAGTAACTATAATGGATTGAGCAATGGTTACAGCCAAGGATATGTGTTGGAGCCTTGTGATGCACCAGGGTGGGATTCAGGCTTTGTATCTTGCTCTAAAAATAAGATGGACTTTTTACCAACATGTAGCATGATAGAAGAGGTTTTTGGAGATGGAAGAAGGCAAGACATGAGAAGAGCTTGA 1545 0.4175 MVQKRPFDAAEEMLEVSFKHPKHAGSSDILVPLSESVIPDDDHYTHLPKTSEEEYAQGNSDCNEKLAGESCDGLPRGAGNSEPSLPVIGIPASSWATSRPIEEDHQSEQPIHLPLFPEYFSPERPIYFSPERPIRTFTRYEDLYSILLEHSPRKPVSVGADHQADVPPWGFSGPTVWDGDEAEKRLMGTCIIPMPEMELSSIDDEVGMGRTDCSCVDRGSMRCVRQHIMEERKKLLKTFGIEKFIELGFAGMGEQVAEKWTPEDENLFHKVIFNNPASLNKNFWNYLSIVFPSRSKKEIVSYYFNVFMLRKRAEQNRNHLLNADSDNDEWQGSDDNEISTHDEDEDSVAEYPIYQDDTNCNDNHMEDYDDEFGEDETCAVNGTVDHTKRNFDDDSKYDHVEMHHSSPPLNQPQDQSVWQDSCDEKVKHDPYTSHDMGVASREIKVKSGNGDNWCSNYNGLSNGYSQGYVLEPCDAPGWDSGFVSCSKNKMDFLPTCSMIEEVFGDGRRQDMRRA 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01708 514 MobiDBLite consensus disorder prediction 322 347 - -
Tsu03g01708 514 MobiDBLite consensus disorder prediction 385 419 - -
Tsu03g01708 514 PANTHER DNA BINDING PROTEIN 1 511 - -
Tsu03g01708 514 PANTHER DNA BINDING PROTEIN 1 511 - -
Tsu03g01708 514 MobiDBLite consensus disorder prediction 386 403 - -
Tsu03g01708 514 CDD SANT 259 307 IPR001005 -
Tsu03g01708 514 MobiDBLite consensus disorder prediction 328 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01708 Tsu-Chr3 17450967 17454639 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01708 - - aprc:113873168 756.518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01708 03 17450967 17454639 Tsu03g01708 03 17450967 17454639 ECH