Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01615 ATGAAGTTTTTTGATCTTGTAATTGCTATTAtagcaattattatttttggaattGGTCTTGAAGAATGTGATTGCAAGATGGTGCAATTCATTTTTGGTGATTCTTTATCTGATGTTGGAAATAATAAGTACTTATCAAAAAGTCTTGCTACAGCAAGTTTACCTTGGTATGGTATTGATTTAGGAAATGGTCTTCCTAATGGGAGGTTCTCTAATGGTCGTACAGTTGCTGATATAATAGGTGACAACATGGGGCTTCCTAGGCCTCCAGCATTTCTAGATCCATCATTAACTGAAGATGTTATATTGGAAAATGGAGTGAACTATGCTTCAGGAGGTGGTGGCATATTGAATGAAACTGGCAGTTATTTTATTCAAAGGTTTTCTCTCTACAAACAGATTGAGTTATTTCAAGGGACACAAGAACTTATTAGAAGCAAAATTGGTAAAGAGAAGGCAGAGAAGTTTTTCCAGGAAGCACGTTATGTTGTTGCTTTAGGTAGCAATGACTTCATCAACAATTACTTGATGCCTCTTTATAGTGATTCATGGACTTACAATGATGAAACCTTCATGGATTACTTAGTAGGAACATTGCAAGAACAACTTAAGacACTCCATGGCCTAGGAGCCAGGGAATTGATGGTATTTGGGCTGGGCCCAATGGGCTGCATTCCACTTCAAAGAGTGCTTAGTACATCTGGAGAttgtcaacaaaaaacaaacaagttAGCACTTAGTTTTAACAAAGCTTCAAGCAAGGTAGTGAATGATTTGGGGAAGCAACTTCCTAATGCAAGCTATAGATTTGGAGATGCATATGATGTGGTTAATGATGTGATTAGCAACCCAAGCAAGTATGGATTTCAAAATGCAGACTCACCATGTTGCTCCTTTGGAAGGATTAGACCTGCTCTTACATGTATACCAGCATCAACATTATGCAAAGATAGAAGCAAATATGTATTTTGGGATGAATATCATCCATCAGATAAAGCTAATGAGCTAATTGCCACTGAACTTATCAAGAAATTTGGGTTTAAGCGTGTTGATCAAACACAATCTCCTACACCATCACCTGAGGTTGCTCCATCACCTACTTCAGATGATTAA 1113 0.363 MKFFDLVIAIIAIIIFGIGLEECDCKMVQFIFGDSLSDVGNNKYLSKSLATASLPWYGIDLGNGLPNGRFSNGRTVADIIGDNMGLPRPPAFLDPSLTEDVILENGVNYASGGGGILNETGSYFIQRFSLYKQIELFQGTQELIRSKIGKEKAEKFFQEARYVVALGSNDFINNYLMPLYSDSWTYNDETFMDYLVGTLQEQLKTLHGLGARELMVFGLGPMGCIPLQRVLSTSGDCQQKTNKLALSFNKASSKVVNDLGKQLPNASYRFGDAYDVVNDVISNPSKYGFQNADSPCCSFGRIRPALTCIPASTLCKDRSKYVFWDEYHPSDKANELIATELIKKFGFKRVDQTQSPTPSPEVAPSPTSDD 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01615 370 MobiDBLite consensus disorder prediction 350 370 - -
Tsu03g01615 370 SUPERFAMILY SGNH hydrolase 161 344 - -
Tsu03g01615 370 MobiDBLite consensus disorder prediction 349 370 - -
Tsu03g01615 370 Gene3D SGNH hydrolase 28 346 IPR036514 -
Tsu03g01615 370 CDD SGNH_plant_lipase_like 30 344 IPR035669 -
Tsu03g01615 370 PANTHER GDSL LIPASE/ACYLHYDROLASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_4G14700) 3 359 - -
Tsu03g01615 370 Pfam GDSL-like Lipase/Acylhydrolase 30 339 IPR001087 GO:0016788
Tsu03g01615 370 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 3 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01615 Tsu-Chr3 15987381 15990455 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g01615 30 338 Acyl Lipid Metabolism Gene Families AT4G10950 33.441 9.26e-63 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01615 - - gmx:100803991 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01615 03 15987381 15990455 Tsu03g01615 03 15987381 15990455 ECH