Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01612 ATGTCAGAGAAGAGTATGGTTCCGTCTAGGTTAATGTTTTGTGTCATTCTTATTTCTATGTTCCTTTTGGTCTTGTCTACGATTTTCCTACTTCAGTTTAGCAGCCATTCTTTTATACCTAGATCAGTTTTAGAGCTTATTATTGTTAACAACTCGTCGTTTTACTTTACGCCTGATTTCAAGAAGGAACAAATAATTCTTCCTACGTACCCTTCTGAGGATTTAAAAGTTCAAACGTTAAAACCTAGAGATTATGATTGGAAAGTTTCCAATTCAAGTAAGAAGAAAAGTTCTGTAGAACAGAAGAATAAGAAGATGAATAGGGTATGTGATCCAACTCGAGCTTTGTTGAAAGTATTCATGTATGACTTGCCTCCGGAATTTCACTTTGGGTTATTGGGTTGGAAGGGAAGTGTAAATCAAACGTGGCCAGAGGTGGATAACCCTAGCCGTATTCCACGTTATCCTGGTGGATTGAATTTGCAGCATAGTATCGAATATTGGCTCACACTTGATCTTCTATCATCAAACATTGCAAAAGCTGGTAAACCTTGTACTGCAATTAGAGTGCAGAATTCAAGTCAAGCAGATATATTTTTTGTGCCATTTTTCTCGTCTTTGAGTTACAATCGGCATTCCAAGACTCAAGGGGAGGGACAAGTTAGCGTTAACAAAATGTTGCAAGACAGATTGGTAAACTTCTTACTGGGGCGAAAAGAGTGGCAACGCTCGGGAGGGAAGAATCATCTAATTATAGCCCATCATCCTAACAGCTTGTTGGATGCAAGAAGAAAATTGGCTTCTGCTATGCTCGTGCTTGCAGATTTTGGAAGGTATCCTGTTGAGTTAGCAAATATCAAGAAGGATATAGTAGCTCCCTATAGACATTTGGTGGGTACGATACCAAGTGCTGAATCACCTTCATACGACGAACGTTCCACGCTGGTGTATTTCCAGGGGGCGATATACAGGAAAGATGGAGGAGTTATTCGCCAAGAACTCTATTACCTCCTCAAAGATGAGAAAGACGTGCATTTTACATTTGGGAGCATAGGTGGAAACGGGGTTAATCAGGCAAGCCAGGGCATGTCCACGTCAAAATTTTGCCTTAACATTGCTGGAGATACCCCATCTTCCAATAGACTCTTCGATGCAATAGTAAGCCACTGTGTTCCCGTGATCATCAGTGATGAAATTGAACTACCATTTGAAGATGTTTTGGACTACTCAGAGTTTTCCTTATTCGTTCGTGGCAGTGATGCCATAAAGAAAGGCTACTTGCTGAAATTCCTTCGTTCAATCAAGCGCAAGGAATGGACCAAGATGTGGGAAAGATTGAAGGAGATTACACATCACTATGAGTATCAATATCCATCCCAATCTGGGGATGCAGTGAACATGATTTGGCAGGAAGTTGCGCGCAAGAAATCTTCAATGCAGTTCAATTCACACAGGAAGAACAGATACAATAGATCTCAGCATCTTGTCAAGACTAACTGA 1500 0.406 MSEKSMVPSRLMFCVILISMFLLVLSTIFLLQFSSHSFIPRSVLELIIVNNSSFYFTPDFKKEQIILPTYPSEDLKVQTLKPRDYDWKVSNSSKKKSSVEQKNKKMNRVCDPTRALLKVFMYDLPPEFHFGLLGWKGSVNQTWPEVDNPSRIPRYPGGLNLQHSIEYWLTLDLLSSNIAKAGKPCTAIRVQNSSQADIFFVPFFSSLSYNRHSKTQGEGQVSVNKMLQDRLVNFLLGRKEWQRSGGKNHLIIAHHPNSLLDARRKLASAMLVLADFGRYPVELANIKKDIVAPYRHLVGTIPSAESPSYDERSTLVYFQGAIYRKDGGVIRQELYYLLKDEKDVHFTFGSIGGNGVNQASQGMSTSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSEFSLFVRGSDAIKKGYLLKFLRSIKRKEWTKMWERLKEITHHYEYQYPSQSGDAVNMIWQEVARKKSSMQFNSHRKNRYNRSQHLVKTN 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01612 499 Pfam Exostosin family 116 424 IPR040911 -
Tsu03g01612 499 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 2 488 IPR004263 GO:0006486|GO:0016757
Tsu03g01612 499 PANTHER EXOSTOSIN FAMILY-LIKE PROTEIN 2 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01612 Tsu-Chr3 15945431 15948014 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01612 - - gmx:100795371 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01612 03 15945431 15948014 Tsu03g01612 03 15945431 15948014 ECH