Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g01014 ATGTGTACTGTAGTAGGAGAAAGAGGTGCTTCTGAGGGTTCAAAATGGTTGAAACATTATTGTAGTGATCATCAAATGCTGTTAGTGGGTGAGGGTGATTTCTCATTCTCACTTTGCCTAGCCAAAGCTTTTGCTTCTGCTTCCAATATTGTGGCTTCTTCTCTTGACACTTATGATGATGTTATCAAGAAGTACAAGTTTGCAAAGTCAAATTTAGCTGAATTGAAGAAGCTAGGAGCATGTATTTTACATGGAGTTGATGCAACCAAGCTGAAATTTGATTCACATTTAAAAATGAGGAAGTTTGATCGTATCATATTCAACTTTCCTCATGCAGGCTTTGTTAGAAAGGAAGCTGACTTGTTGATGATCAAGATGCATAAAGAACTTGTgtatggtttcttcaagaatgcAAAGCGCAAGCTTGTGGCCAATGGTGAAATTCATGTCAATCACAAAACTAAACCACCCTACACTTACTGGAACATAGAGAAGCTTGCTGAACAAAGCTTTCTAACCTTGATTGAGTGTGCTATATTCAAGAAAGAAGATTATCCAGGTTATAACAACAAGCGAGGAGATGGAAATCGATGTGATAAATCGTTTTATCTTGGTCAATGCAGGACCTTCAAATTTACATCACTTGATACTAGAAATGATCAAATGAACAAGGCTACAGATGCCAATAAGGCTACTATGTTTTGTGCAATGTATTGCCTAAGAAAAGTTTGA 732 0.3593 MCTVVGERGASEGSKWLKHYCSDHQMLLVGEGDFSFSLCLAKAFASASNIVASSLDTYDDVIKKYKFAKSNLAELKKLGACILHGVDATKLKFDSHLKMRKFDRIIFNFPHAGFVRKEADLLMIKMHKELVYGFFKNAKRKLVANGEIHVNHKTKPPYTYWNIEKLAEQSFLTLIECAIFKKEDYPGYNNKRGDGNRCDKSFYLGQCRTFKFTSLDTRNDQMNKATDANKATMFCAMYCLRKV 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g01014 243 Coils Coil 58 78 - -
Tsu03g01014 243 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 35 173 IPR029063 -
Tsu03g01014 243 Gene3D Vaccinia Virus protein VP39 14 179 IPR029063 -
Tsu03g01014 243 PANTHER PHENYLALANYL-TRNA SYNTHETASE 15 213 - -
Tsu03g01014 243 Pfam rRNA (uridine-N3-)-methyltransferase BTM5-like 27 192 IPR019446 GO:0070042|GO:0070475
Tsu03g01014 243 PANTHER BNAC06G26310D PROTEIN 15 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g01014 Tsu-Chr3 9393845 9396523 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g01014 - - mtr:MTR_3g061070 312.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g01014 03 9393845 9396523 Tsu03g01014 03 9393845 9396523 ECH