Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00670 ATGGAGAGAGCAAACACTAAATCTTCTTTGAAGTTTGTCAAGAacacttcaccttcttcatctCAATGGAGTAGTACTGATTCTAAAGGAATGACAAAAGATGTACTCAAAGACAAGTTTTATGACAAGACTAaggCTTCAAGAAAATCTCCtacaaaagaaaatactaaACCACAAGAATTCAAACTCCACACACAAGAAAGAGCTGTTAAACGTGCAATATTCAACTATGAAGTGACAACAAAATTATATCTCATGGAGTTGAAAAAGAGACAAGAAGAGAAGTTGATGAAGATgattgaagaggaagagatACGTTTGCTAAGGAAGGAAATGGTTCCAAGAGCTCAATTGATGCCTTATTTTGATAAGCCATTTTCCCCACAAAGATCAAACAGAACAGTTCAAAGAGAATCATGCATCCACATGTTGAGTAGCAAATGCTGGAGCTGCACCTCTGGCAATGGATTTTACAACATGCATCAATGTGGTCATCAAGCTCTTAACAATCCCATTAAATAG 522 0.3257 MERANTKSSLKFVKNTSPSSSQWSSTDSKGMTKDVLKDKFYDKTKASRKSPTKENTKPQEFKLHTQERAVKRAIFNYEVTTKLYLMELKKRQEEKLMKMIEEEEIRLLRKEMVPRAQLMPYFDKPFSPQRSNRTVQRESCIHMLSSKCWSCTSGNGFYNMHQCGHQALNNPIK 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00670 173 PANTHER TARGETING PROTEIN FOR XKLP2 1 165 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
Tsu03g00670 173 MobiDBLite consensus disorder prediction 31 61 - -
Tsu03g00670 173 MobiDBLite consensus disorder prediction 8 30 - -
Tsu03g00670 173 PANTHER TPX2 (TARGETING PROTEIN FOR XKLP2) PROTEIN FAMILY 1 165 - -
Tsu03g00670 173 Coils Coil 86 106 - -
Tsu03g00670 173 Pfam Targeting protein for Xklp2 (TPX2) domain 61 133 IPR027329 -
Tsu03g00670 173 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00670 Tsu-Chr3 5935456 5938444 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00670 - - mtr:MTR_3g064800 310.842