Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00646 ATGGAGGAACCTAACTCCGACCAAGAAAACCAATTATCGCACAAAATTGCCGCAATTTTGGACGAAGTTCGAATCTCATACGCTACACACAACCGAAAGCTCAAGGAACTATCACTCCTCCGATCCAAATCCTCTTCACCGTCGCAATTCTTCTCCGCTTTCTCCAAATCCCTAATTCCTCTCTTCAACTTCCAAAGACGCCTTGCTTCTGCTGACCGGGTCGTTTCCTTCGTCTCGTCTTTTACTGCCGCTCGTAATCCTACTGATGCCGAAGTTTGTGATGAGTTTCTCGACCATTTCCTTCATTTTCTCCTTGTTGCCGCTACGGCGGCTGATAAGACCGTTAGATTCAGAGCCTGCCAGATCGTTTCTGAGATAATATTGCGGTTACCAGATGATGCAGAAGTGAGCAATGACCTATGGGATGAGGTGATTGAATGTATGAAGGTTAGGGTACAGGACAAGATCCATGTGGTGCGTACTTTTGCGGTTAGGGCGCTTTCACGTTTTGTGAATGACTCTTCGAACATTGACATCCTTGATTTATTCCTTGAGATGCTTCCTTTAGAACAAAATGCGGACGTTCGTAAGATGATTGTATTGTCTTTGCCTCCTTCCAGTGCAACCTCTCAAGTTATCATTGACTGTACCTTGGATGTTAGTGAGTCTGTTCGCAAAGCAGCATACTGTGTATTAGCTAATAAATTTCCTCTTCAAAGCTTAAGCATTAAGCTCAGGACAGTAATACTTCGGAGAGGACTTTCTGACCGATCTGTTGGTGTCTCAAAGGAATGTTTCAAACTTTTGAAAGATGAATGGCTTGTTAAGTGCTGCAATGGTGATCCTTTAGAGCTTTTGAAGTATCTAGATGTTGAAACCTATGAATCAGTGAGCGAGTCTGTCATGGAGGCACTTCTAAAAGCTGGTTTAGTAAAACTAAAGAATGGTGCAAGTATCCAGCAGTATATATCATCAAATGGTGACACAGCAGAAGGTGAAGTGGTTCCTTGTCCACCAAGCATTGTACTGATGGAAGCAGAGGCTGCTCTTTATTGGAGAACTGTTTGCAAACATTTGCAGTCAGAAGCACATGCTTTAGGCTCTGATGCTGCTGCCACAGCGGGTACCGAAGCAGAAGTATACGCTGCAGAAGCATCAGATAAAAATGACCTTCTAGAAAAAATTCTTCCTGCTACAGTTGATGAGTACATAGAGTTGGTCAGAGCCCATATCGTTGCTGGATCAAACCATCGCTTTGCATGCCGGCAGCTGCTTTTGCTTGGTGctatgtttgatttttctgACACTTCATATAGAAAAGCTGCTAGTGTGTTTCTACAGGAGCTGATGAGCAAGCCTCCTGAGCACGAGGTTGATAATGAAGGGAATGTTGTCGTCATTGGAGATGGCCTAAGTTTTGGTGGAGATACTGAGTGGGCAGAAGCCATAGCCAAATTGGCAAGGAAAGTCCATGCTGCTCCTGGTGAATTTGAAGAAGTTGTTCTTGCAATCGTAGAAAAGCTTGCTCAACCTTGCAGAGAGAGAACAGCAGATTATGTGCAGTGGATACACACCCTTTCTCTTATAGGCCTTCTACTGAAAAATGCAGTGTCCATGCGCTTTCTTCAGGGCAAGGCTATAGAACCAGATGAACTACTGCAATCATTACTTCTTCCTGGGGCAAAACAATCTCACTTGGACGTGCAAAGAATTGCTGTAAGATGTCTTGGCCTCTTTGGGCTTTTGGAGAGGAAACCAAACGCTGAACTTTTGAAACAGCTACGGGTTTCATACATTAGGGGGCCGCATTTAATTAGTATTGAGGCTGGTAAAGCATTAACTGATCTTGTGATGTGGCATGGTCCTCAAGAAGTTGACAGGGTTTTAAATCACAATATTCCAAGCCAAGTAAACAGTgacaaaaaatgtttttgtccTGTGAATTTCTCTGATTCAGAAGtggattcaaattcaaatgttGACATGCTTGATCTTTTATACGGTGGTATTGAAAATGAAGACTGGGCTAATCCTTTAACTAGCAATGAAGATGAATGCATTTATGCTATACTCGGGGAGGGCTTTGCGAAAATTCTTCTCCTAAGTGACAACTATCCAAGCATACCAGCTTCTTTGCACCCTGTGCTTTTATCTAAGCTCATTTACTTGTACTTCAGTGACATATCAGAAAATATGCACAGGTTGAAGCAATGCTTATCGGTTTTCTTTGAGAACTACCCGTGTCTCTCAACAAATCACAAGAGGTGTATATTGAAGGCCTTCATTCCAGTTATGCGTTCAATGTGGCCAGGAATTTTTGGCAATTCTGGGGGTTCTCCTTTTATGGTATCTCAGATGCGTAAGCGTGCAGTTCAAGCTTCACGTTTTATGTTGCAGATGGTGCAGATTCCATTATTTGTTAAAGAGACTGAAGCAGCAAGTGAAAACTCTAGTACAGAACAGCCACAAGTTATAGATAGTTGCGCTGAAGTCCCATTTGAGTGTGGCGAGGAGGGGCTCGCACTACGCATAGCTGTAGAGGTTGCAAGCTTTCACTCAAAGAAGACAGCTGCTGAGAAGGCATATGTATCGGCATTATGTAGGATACTTGTCTCCCTTCATTTTCGGTTATCAGAACAAGGGCCAATAAAAATTATGAGGAAACTTTTATGTCGAATGGTTGAATGTGTATCTTCAGAGAAGGATGTTGTTAAAGAACTGAAGCGCATGGCAGAGCATCTAGTGACAATTGACAGGCAACAAGACCAGGAATTGTTGCAAGATGAAGTTGATCTCATTTTGGGGAAACTGGAACTCGACTTCAACCTTGATTTGGATGCTTCTGTTGAAATACCACAAACACCAGCTGTACAACGAACGAGAGCTACTAGAACAAGGAGAAGGGTAAGGATTGAGGAAGATAGTTCTGAATCTGATAATGAAGATTCATATGCTTCTGTGGTTCCTACCACCGTTAATATGGTAAAAGGTCGCTCACAGAGAGCAAGCAAAACTGCAGCCATGAACAAGATGTCGTCTGCCTGTAGACCAGTCAAAACCGATGAAATTGAAGAGGAAGACGAAGAGGAAGAAGTATCGAATGTGACATCTGAAGATTCTGAAGAATCGGAATAG 3135 0.4223 MEEPNSDQENQLSHKIAAILDEVRISYATHNRKLKELSLLRSKSSSPSQFFSAFSKSLIPLFNFQRRLASADRVVSFVSSFTAARNPTDAEVCDEFLDHFLHFLLVAATAADKTVRFRACQIVSEIILRLPDDAEVSNDLWDEVIECMKVRVQDKIHVVRTFAVRALSRFVNDSSNIDILDLFLEMLPLEQNADVRKMIVLSLPPSSATSQVIIDCTLDVSESVRKAAYCVLANKFPLQSLSIKLRTVILRRGLSDRSVGVSKECFKLLKDEWLVKCCNGDPLELLKYLDVETYESVSESVMEALLKAGLVKLKNGASIQQYISSNGDTAEGEVVPCPPSIVLMEAEAALYWRTVCKHLQSEAHALGSDAAATAGTEAEVYAAEASDKNDLLEKILPATVDEYIELVRAHIVAGSNHRFACRQLLLLGAMFDFSDTSYRKAASVFLQELMSKPPEHEVDNEGNVVVIGDGLSFGGDTEWAEAIAKLARKVHAAPGEFEEVVLAIVEKLAQPCRERTADYVQWIHTLSLIGLLLKNAVSMRFLQGKAIEPDELLQSLLLPGAKQSHLDVQRIAVRCLGLFGLLERKPNAELLKQLRVSYIRGPHLISIEAGKALTDLVMWHGPQEVDRVLNHNIPSQVNSDKKCFCPVNFSDSEVDSNSNVDMLDLLYGGIENEDWANPLTSNEDECIYAILGEGFAKILLLSDNYPSIPASLHPVLLSKLIYLYFSDISENMHRLKQCLSVFFENYPCLSTNHKRCILKAFIPVMRSMWPGIFGNSGGSPFMVSQMRKRAVQASRFMLQMVQIPLFVKETEAASENSSTEQPQVIDSCAEVPFECGEEGLALRIAVEVASFHSKKTAAEKAYVSALCRILVSLHFRLSEQGPIKIMRKLLCRMVECVSSEKDVVKELKRMAEHLVTIDRQQDQELLQDEVDLILGKLELDFNLDLDASVEIPQTPAVQRTRATRTRRRVRIEEDSSESDNEDSYASVVPTTVNMVKGRSQRASKTAAMNKMSSACRPVKTDEIEEEDEEEEVSNVTSEDSEESE 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00646 1044 Pfam Nuclear condensing complex subunits, C-term domain 526 875 IPR025977 -
Tsu03g00646 1044 MobiDBLite consensus disorder prediction 956 1044 - -
Tsu03g00646 1044 SUPERFAMILY ARM repeat 89 762 IPR016024 -
Tsu03g00646 1044 PANTHER CONDENSIN COMPLEX SUBUNIT 3-RELATED 7 1030 IPR027165 GO:0000796|GO:0007076
Tsu03g00646 1044 MobiDBLite consensus disorder prediction 981 1010 - -
Tsu03g00646 1044 MobiDBLite consensus disorder prediction 1022 1044 - -
Tsu03g00646 1044 PANTHER CONDENSIN COMPLEX SUBUNIT 3 7 1030 - -
Tsu03g00646 1044 Gene3D - 56 248 IPR011989 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00646 K06678 - gmx:100817677 1533.08