Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00644 ATGCCAGACTGTTCCTCCTGTGTTGCACACGCCGTCTCACACGCCGGAGACATTTGTCCAGGTGCATGCGGCGGGGTAGTGCAACTAGAAGGATGCTATGTGAAATATGATAATCTTAAGTTTTTAGGTGCGGAGGATAAAACAATTGTGTTGAAGAAATGTGGACCCTATGTTGGGTATGATACGGGTACCCGAGATGCGGTTTTGTCCGGGTTGATGGGTTCGGGTGGTGGGTATTTTAGAGTTGGTGGGTCGGGTCAGTTGAAGGGAATGGCACAGTGTATTGGTGATTTGAGTTTTGTGGAGTGTGAGGATTGTGTTTCGGAAGCGATCCGACGGTTGAGAAGTGATTGTCCTGCCGCGGATTATGGTGATATGTTTTTGGGGAAGTGTTATGCGAGGTACTCtactggtggtggtggtggtggtgcggCCCATTCTTACTCCAAGGCCCATGGTAAATCGGACAACAATGGTAAATAA 483 0.4534 MPDCSSCVAHAVSHAGDICPGACGGVVQLEGCYVKYDNLKFLGAEDKTIVLKKCGPYVGYDTGTRDAVLSGLMGSGGGYFRVGGSGQLKGMAQCIGDLSFVECEDCVSEAIRRLRSDCPAADYGDMFLGKCYARYSTGGGGGGAAHSYSKAHGKSDNNGK 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00644 160 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 1 147 - -
Tsu03g00644 160 ProSiteProfiles Gnk2-homologous domain profile. 37 140 IPR002902 -
Tsu03g00644 160 Gene3D - 65 138 IPR038408 -
Tsu03g00644 160 Gene3D - 1 41 IPR038408 -
Tsu03g00644 160 PANTHER PLASMODESMATA-LOCATED PROTEIN 7 1 147 - -
Tsu03g00644 160 Pfam Salt stress response/antifungal 85 137 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00644 Tsu-Chr3 5632574 5634362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00644 3 159 Receptor kinase-like Gene Family AT1G70530 27.841 3.66e-08 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00644 - - gmx:100811615 229.95