Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00602 ATGGAAGATCCATCGGAGAGATTGGGATCGGAGGATTTGGACACAACCATAACCATTAAGGCAGATGATTTGTCCATGGAAATTGATCCGCCTTTTCAGGAAAACGCTGTAACTGCCGAAGATTGGCGGAAGTCTCTTCGCAAAGTCGTCCCTGCCGTCGTCGTTCTCCGAATAACTGCTACTCGTGCTTTTGACACTGAATCTGCTTCTGCCAGTTCAGCTACCGGTTTTGTGGTCGATAAACGCCGTGGGATTATTCTCACTAATCGTCATGTCGTTAAGCCTGGACCTGTTGTTGCTGAAGCTATGTTTTTGAACCGCGAAGAAGTTCCGGTTCATCCTATTTACAGAGATCCAGTAcatgattttggattttttcaGTATGATCCAAGTGCTATACAATTTCTAAATTATGAAGAGATACCTCTTGCCCCTGAAGGTGCTTGTGTTGGATTAGAAATCAGAGTGGTTGGTAATGATAGTGGTGAGAAGGTTTCCATTTTGGCTGGTACTCTTGCTCGTTTGGATAGGGATGCTCCCCACTATAAGAAGGATGGTTATAACGACTTCAACACATTCTATATGCAAGCAGCATCTGGGACCAAAGGAGGATCGAGTGGTTCCCCAGTTATAGATTGGCAAGGCAGGGCTGTTGGCCTGAATGCTGGGAGCAAGACAACAAGTGCATCGGCTTTCTTTTTACCTCTAGAACGAGTTGTGAGGGCATTAAGGTTTCTTCAACAGGGGAGTGAAACTTATGTTGATAAATGGATGCCAGTTTCTATACCTCGTGGCACTCTTCAGGTGACTTTTCTCCATAAAGGGTTTGATGAGACTCGTCGGCTTGGCCTCAGAACTGAGACAGAGCAGatagttCGAAATGCTTCTCCTGCCAGTGAAACTGGAATGCTTGTTGTGGAATCTGTGGTGCCAGGTGGTCCAGGTTTTAAACATTTGGAACCAGGGGATGTACTTGTTCGTGTCAATGGCGAGGTTATTACCCAATTCCTGAAACTGGAGACTATACTTGATGACAGTGTAAACTCAAATATCGAATTACAAATTGAAAGGGGTGGCGCATCAAAGAGTTTAACTTTATCGGTGCAAGATTTGCACTCAATAACTCCCAATTATTTCTTGGAAGTTAGTGGAGCAGTAATCCAACCTCTTTCATATCAGCAGGCTAGAAACTTCCGATTCAATTGTGGTCTTGTTTATGTGACAGAACCAGGATATATGCTCTTTAAAGCAGGAGTTCCTCGCCATgcaataattaagaaatttgcTGGTGAAGAAATATCTTGTCTTGAGGAACTAATATCAGTTCTGTCCAAGCTATCAAGGGGTGCTCGAGTGCCACTGGAGTATATAAGCTACGTGGATCGTCATCGAAGGAAGTCGGTGTTGGTGACGGTTGATCGCCATGAATGGTATGCACCTCCCCAGATATACACTCGGGACGACAGTACTGGCCTCTGGATTGCTAAGCCTGCTTTTCAACCTGATTCTCCTTTTTTATCATCTGGGAATAAAGATGTTGGAAATCTGGCCAGTCGTCCAAGTTCATTGACTGGTGAGCATGCTTGTGGGGGTAATGTTTGTGAAGGTAACCATCAGGAGTTGGTTGATGGTGTCACTAGCATGGAAACTAATTCTGAAGATCCTTCAGAGTGTGTATCTCACGACAATGAATCTGATGGGTTAGTAAAAAAACGGAGAGTGGATGATTTATCAACTGATGGAAGTGTTGCTGATATTTCCTTAAATGAGCCTGAGGGAACTAATCTAGAAAAATCAGGTGCCATACAAGATGATGGGTTAATGGACTATCAAGGTGCAACTGCTGCCACAGCAAATGCATCAGTCACTGAACGTGTGATTGAGTCTACTCTTGTGATGTTTGAGGTTCACGTTCCTCCATCTTGTATGCTTGACGGTGTTCATTCACAGCATTTTTTTGGAACCGGAGTTATAATATATCACAGTCAAGATATGGGATTAGTTGCAGTTGACAAGAATACTGTTGCAGTATCTTCCTCTGATGTGTTGCTATCTTTTGCTGCTTTCCCAGTTGAAATTCCTGGAGAGGTGGTATTTCTCCATCCTGTTCATAATTATGCTCTCATATCATATGATCCATCTGCTTTGGGACCTGTTGGTGCTTCGGTGGTTCGTGCCGCAGAATTACTTCCAGATCCGGCATTACGTCGAGGAGATTCTGTTCACCTTGTGGGCTTAAGTAGAAGCCTTCAAGCAACTTCTAGGAAATCAGTTGTTACCAATCCTTCCGCTGCTTTAAATATAGGGTCTGCAGACTCCCCACGTTACAGAGCGACCAATATGGAAGTTATTGAGCTTGATACTGATTTTGGTAGTTCATTTTCGGGTGTGCTAACAGATGAACAAGGTAGGGTCCAAGCATTATGGGCAAGCTTCTCTACTCAGCTGAAATTCAGTGGCAGCTCATCAGAAGATCATCAATTTGTGAGGGGGATTCCAATTTATGCAATAAGCCAGGTTCTAGACATGATCATATCTGGTGTGAATGGACCACCCCTTCTAATAAATGGTGTAAAAAGACATATGCCACTTCTTAGAATATTAGAAGTTGAACTTTATCCAACATTACTTTCAAAGGCTCGCAGTTTTGGACTAAGTGATGCTTGGATTCAGGCATTTGTTAAGAAAGACCCAATAAGACGACAGGTTTTACGTGTGAAAGGTTGTTTGGCTGGATCAAAGGCTGAGAATCTTTTGGAGCAAGGGGACATGGTTTTAGCAATCAATAAAGAACCAGTCACATGCTTCCGTGACATTGAAAATGCTTGCCAAGCTTTAGATCAACCTAATACCAACGATGGCAAGCTTCAGATGACTATTTTTCGGCAGGGACGAGAGGTTGAACTTCTTGTGGGAACAGATGTCAGGGATGGAAATGGCACAACTCGTACAATTAATTGGTGTGGTTGTATAGTACAAGATCCACATTCAGCAGTACGTGCTCTTGGATTTCTTCCTGAAGAGGGTCACGGTGTATATGTGGCAAGGTGGTGTCATGGGAGTCCTGTACATAGATATGGTCTGTATGCTCTTCAGTGGATAGTTGAAATTAATGGAAAACCAACTCCAGATCTAGATTCTTTTGTTAACGTGACGAAGGAACTTGAGCATGGGGAGTTTGTTCGGGTTAGGACAATTCACCTTAATGGGAAGCCGCGAGTCCTAACTTTGAAACAAGATTTACATTACTGGCCTACCTGGGAATTAAGGTTCAATCCAGACACGGCAATTTGGCATCGTAATGTAATCAAGGCATTGAACCGCAGTACTGCAGCATCTGGGACCAAAGAAGGATCGAGCGGTTCCCCAGTTATAGATTGGCGAGGTAGGGCAGTGGCCCTGAATGCTTGGGGCAACACATCGAATACATTGGCATTCTTTTTACCTCTAGAAAGAGTGATTTTTCTCCATAAAGGGTTTTATGAGACACGTCCGCTTGGCCTCATAAGTGAGACAGAGCAGACAGTACGGCAGGATTCTCCTGCCAGCGAAACTGGAATGCTTGTTGTGGAATCTGTGGTGCCAGGTGGTCCTGCCGATAAACATTTGGAACCGGGTGATGTACTTGTTCGTGTCAATGATCAGGTCATTATACAATTCCTGAAACTGGAGACTAAGCTTGATGACAATGTAAACTCAAATATTGAATTACAAATTGAAAGAGGTGGCTCATCAAAGACTTTAACTATATTGCGGAGCAGTAATCCATCCTCTTCCATATCAGCAGAGCCAGCATTATATCGAGGAGATTCTGTTTACCTTGTGGGCTTAAGTCCAAACCTTCAAGCAACTTCTAAGAAATCAGTTGTTACCAATTCTGGCAATCCATTAACAATAGCATCTTCAGGCTATCCATTTTATAGAGCAACCAATATGGAAGTTATTGAGCTTGATAGTGATAATGGTAATTCATTTTTGGGTGTGCTAACAGATGAACAAGGAAGGGTTCAAGCTTTATGGGGAGTCTTCTCTACTCAGGTTCAGATGAAATTAGGTGGTAATACATCAGGACTTTTGCAGTTTTCGAAGGGGATTCCGATTTATGCTATAAGCCAGGTCCTGGACAAGATCATATCTGGTGCAAATGGACCACTTCTTCTCATAAATGATGTCAAAAGATCTATGCCACAAGTGAGAACTTTAGAAGTTGAACTTAAACCAAAATTACTTTCCAAGGCTCGTAGTTTAGGACTAAGTGATCTTCGCATTAAGACACTTGTTAACAAAGACCCAATAAGACAACATGTTTTACAAGTTGAAGGTTGTTGGGCTGGATCAAAGGCTGAAAATCTTTTGGCGCAAGGGGACATTATTTTAGCAATCAATAAAGAACCAGTCAGATGCTTCCGTGACATTGAAAATGCTTGCCAAGCTTTAGATAAATCTAATACCAATGATGGCAAGCTTCAGATGACTATTTTGCGGCAGGGACAAGAGATTGAACTTCTTGTGGGAACAGATGTTCGGGATGGAAATGGCACAACTCGTGCGGTTAGTTGGTGTGCTTGTATAGTTCAAGATCCACATTCAGCAGTACGTGCTCTTGGATTTCTTCCAGAAAAGGGTCGCGGTGTATATGTGGCAAGGTGCTTTTACGGGAGTCCTGGACAAAGATATGGTCTGTGTTCTATTAAGTGCGTAGTTGAAATTAATGGAAAACCAACTCCAGATCTAGATTCTTTTGTTGATGTTACAAAGGAACAAGAGCATGGAGAGTTTTTTCGGGTAAGGACAGTGCAACTCAATGGAAATCCACAAATCGTAACATTGAAGCAAGATTTGCACTACTGGCCTACCTGGGAATTAAGGTTTAATCCAGACACGGCAATTTGGCATCGTAATGTAATCAAGGCATTGAACCACAGTACTGTATGA 4935 0.4249 MEDPSERLGSEDLDTTITIKADDLSMEIDPPFQENAVTAEDWRKSLRKVVPAVVVLRITATRAFDTESASASSATGFVVDKRRGIILTNRHVVKPGPVVAEAMFLNREEVPVHPIYRDPVHDFGFFQYDPSAIQFLNYEEIPLAPEGACVGLEIRVVGNDSGEKVSILAGTLARLDRDAPHYKKDGYNDFNTFYMQAASGTKGGSSGSPVIDWQGRAVGLNAGSKTTSASAFFLPLERVVRALRFLQQGSETYVDKWMPVSIPRGTLQVTFLHKGFDETRRLGLRTETEQIVRNASPASETGMLVVESVVPGGPGFKHLEPGDVLVRVNGEVITQFLKLETILDDSVNSNIELQIERGGASKSLTLSVQDLHSITPNYFLEVSGAVIQPLSYQQARNFRFNCGLVYVTEPGYMLFKAGVPRHAIIKKFAGEEISCLEELISVLSKLSRGARVPLEYISYVDRHRRKSVLVTVDRHEWYAPPQIYTRDDSTGLWIAKPAFQPDSPFLSSGNKDVGNLASRPSSLTGEHACGGNVCEGNHQELVDGVTSMETNSEDPSECVSHDNESDGLVKKRRVDDLSTDGSVADISLNEPEGTNLEKSGAIQDDGLMDYQGATAATANASVTERVIESTLVMFEVHVPPSCMLDGVHSQHFFGTGVIIYHSQDMGLVAVDKNTVAVSSSDVLLSFAAFPVEIPGEVVFLHPVHNYALISYDPSALGPVGASVVRAAELLPDPALRRGDSVHLVGLSRSLQATSRKSVVTNPSAALNIGSADSPRYRATNMEVIELDTDFGSSFSGVLTDEQGRVQALWASFSTQLKFSGSSSEDHQFVRGIPIYAISQVLDMIISGVNGPPLLINGVKRHMPLLRILEVELYPTLLSKARSFGLSDAWIQAFVKKDPIRRQVLRVKGCLAGSKAENLLEQGDMVLAINKEPVTCFRDIENACQALDQPNTNDGKLQMTIFRQGREVELLVGTDVRDGNGTTRTINWCGCIVQDPHSAVRALGFLPEEGHGVYVARWCHGSPVHRYGLYALQWIVEINGKPTPDLDSFVNVTKELEHGEFVRVRTIHLNGKPRVLTLKQDLHYWPTWELRFNPDTAIWHRNVIKALNRSTAASGTKEGSSGSPVIDWRGRAVALNAWGNTSNTLAFFLPLERVIFLHKGFYETRPLGLISETEQTVRQDSPASETGMLVVESVVPGGPADKHLEPGDVLVRVNDQVIIQFLKLETKLDDNVNSNIELQIERGGSSKTLTILRSSNPSSSISAEPALYRGDSVYLVGLSPNLQATSKKSVVTNSGNPLTIASSGYPFYRATNMEVIELDSDNGNSFLGVLTDEQGRVQALWGVFSTQVQMKLGGNTSGLLQFSKGIPIYAISQVLDKIISGANGPLLLINDVKRSMPQVRTLEVELKPKLLSKARSLGLSDLRIKTLVNKDPIRQHVLQVEGCWAGSKAENLLAQGDIILAINKEPVRCFRDIENACQALDKSNTNDGKLQMTILRQGQEIELLVGTDVRDGNGTTRAVSWCACIVQDPHSAVRALGFLPEKGRGVYVARCFYGSPGQRYGLCSIKCVVEINGKPTPDLDSFVDVTKEQEHGEFFRVRTVQLNGNPQIVTLKQDLHYWPTWELRFNPDTAIWHRNVIKALNHSTV 1644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00602 1644 SUPERFAMILY Trypsin-like serine proteases 630 845 IPR009003 -
Tsu03g00602 1644 SUPERFAMILY PDZ domain-like 1542 1627 IPR036034 GO:0005515
Tsu03g00602 1644 MobiDBLite consensus disorder prediction 548 567 - -
Tsu03g00602 1644 Gene3D - 146 258 IPR043504 -
Tsu03g00602 1644 Gene3D - 1436 1510 IPR036034 GO:0005515
Tsu03g00602 1644 Gene3D - 903 977 IPR036034 GO:0005515
Tsu03g00602 1644 SUPERFAMILY Trypsin-like serine proteases 40 244 IPR009003 -
Tsu03g00602 1644 CDD PDZ_serine_protease 280 366 - -
Tsu03g00602 1644 SMART pdz_new 1414 1497 IPR001478 GO:0005515
Tsu03g00602 1644 SMART pdz_new 1164 1243 IPR001478 GO:0005515
Tsu03g00602 1644 SMART pdz_new 280 359 IPR001478 GO:0005515
Tsu03g00602 1644 SMART pdz_new 881 964 IPR001478 GO:0005515
Tsu03g00602 1644 SMART pdz_new 1533 1602 IPR001478 GO:0005515
Tsu03g00602 1644 SMART pdz_new 1000 1069 IPR001478 GO:0005515
Tsu03g00602 1644 Pfam PDZ domain 305 357 IPR041489 -
Tsu03g00602 1644 SUPERFAMILY PDZ domain-like 1009 1086 IPR036034 GO:0005515
Tsu03g00602 1644 PANTHER PRO-APOPTOTIC SERINE PROTEASE NMA111 1153 1251 - -
Tsu03g00602 1644 PANTHER PRO-APOPTOTIC SERINE PROTEASE NMA111 21 1106 - -
Tsu03g00602 1644 PANTHER PRO-APOPTOTIC SERINE PROTEASE NMA111 1110 1154 - -
Tsu03g00602 1644 CDD PDZ_serine_protease 1166 1250 - -
Tsu03g00602 1644 PANTHER PROTEASE DO-LIKE 7 1110 1154 - -
Tsu03g00602 1644 Gene3D - 29 140 IPR043504 -
Tsu03g00602 1644 Gene3D - 278 375 IPR036034 GO:0005515
Tsu03g00602 1644 Gene3D - 984 1082 IPR036034 GO:0005515
Tsu03g00602 1644 Gene3D - 1168 1256 IPR036034 GO:0005515
Tsu03g00602 1644 Gene3D - 1520 1615 IPR036034 GO:0005515
Tsu03g00602 1644 SUPERFAMILY PDZ domain-like 304 400 IPR036034 GO:0005515
Tsu03g00602 1644 SUPERFAMILY PDZ domain-like 1188 1262 IPR036034 GO:0005515
Tsu03g00602 1644 SUPERFAMILY Trypsin-like serine proteases 1107 1154 IPR009003 -
Tsu03g00602 1644 PANTHER PRO-APOPTOTIC SERINE PROTEASE NMA111 1260 1639 - -
Tsu03g00602 1644 Pfam Trypsin-like peptidase domain 74 220 - -
Tsu03g00602 1644 ProSiteProfiles PDZ domain profile. 1153 1254 IPR001478 GO:0005515
Tsu03g00602 1644 Pfam Peptidase family M50 1189 1291 IPR008915 GO:0004222|GO:0006508
Tsu03g00602 1644 PANTHER PROTEASE DO-LIKE 7 1153 1251 - -
Tsu03g00602 1644 PANTHER PROTEASE DO-LIKE 7 1260 1639 - -
Tsu03g00602 1644 SUPERFAMILY PDZ domain-like 1438 1539 IPR036034 GO:0005515
Tsu03g00602 1644 ProSiteProfiles PDZ domain profile. 269 333 IPR001478 GO:0005515
Tsu03g00602 1644 Pfam PDZ domain 1181 1250 IPR001478 GO:0005515
Tsu03g00602 1644 SUPERFAMILY PDZ domain-like 905 1007 IPR036034 GO:0005515
Tsu03g00602 1644 PRINTS HtrA/DegQ protease family signature 84 96 IPR001940 GO:0004252|GO:0006508
Tsu03g00602 1644 PRINTS HtrA/DegQ protease family signature 318 330 IPR001940 GO:0004252|GO:0006508
Tsu03g00602 1644 PRINTS HtrA/DegQ protease family signature 213 230 IPR001940 GO:0004252|GO:0006508
Tsu03g00602 1644 PRINTS HtrA/DegQ protease family signature 150 174 IPR001940 GO:0004252|GO:0006508
Tsu03g00602 1644 Pfam PDZ-like domain 981 1057 IPR025926 -
Tsu03g00602 1644 Pfam PDZ-like domain 373 446 IPR025926 -
Tsu03g00602 1644 PANTHER PROTEASE DO-LIKE 7 21 1106 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00602 K22686 - gmx:100809144 1978.37