Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00566 ATGTGGtttgattttttgcttttgcaGGTTGAACCTTGTGATGTATGTGGTGCTGTTGGTTTTGGAGAAATAATTGTAACTTGCTCGAAATGCAAATTAACTCGTGAACATCTTTACTGCATGCGAAATAATCTAATGGAGGTTCCAGATTACTGGCTTTGTGAAACATGTGAATCAAAAAGTGGTTCAACTTCATCATGTATAGTGAAACAGGATTCTGGTTTACAGGCTTCCAGAAGGCAACACTCTGTTAGAAAAGGCCCGTTGGGGAAAGTGAAGTACCTTGACGTGGATGAAGTCCTTAAACTTTCTGGTGGTAATTTTACCGTGAAACCTACTCCATCAAGGTCTAGTTTGTCAATGAGCAGGATGGCTAGTCCAGGAAGCTCTAATTTCCGGATGACCGGAAGAGATTTTGTTGCATCAAAAAGTGTTATTCCGAAGAATCCCTCCCTGACTCTAAAGCCAAATCCTCGCATATCATCTACGGCACATTGGAAGTTTCCAAGAAATGgagttaaaaaaaatccaatgatTGATCAACGTGCTTCACCATCAATAGGtgagaaacaaaataatttgagaTTGTGTTTTTCTGCAATCACCACTATTATCTTTATAGTAACATTATGTGATATCTTTATAATTGTTCATATTGTAGGACCAGCAAAGGCGAATAAACTTGTATCTCAGCGACGAGTGAGTGCACCAATACCTGATAGAAAACTTCAACCTCTTAAAGTTCAAACTCTTGATCGTCAGAGAGAAAAGCCTACAAAAGGGGAACCTTATAAAGATTTGTCTGTCACTAAATCTTCACCTGCTGTTGTTTCAGATGCTGTTGCTGAATCCAACAGATTTAATACAGAAGGAAGCAAGAATAAGAATATTTATGAAGACGTCCACcgtgattttaaatatttgccCTCATCGATTCATGCTTGGAGTGGCCAATTCCAAATTCTTCAAAAAGCTGCATCTGGTGAATTTTATGATGGCTTTGAAGCTCAACCTCCATGCATTGTTCATAGGAAGGCATACATACTTTCAAACAAAATGCCCTCTGTCCTTCAGCTGGAATCACTTTCTGCTTCAAATGTATTGACTGATGTATTCCAGAACTATTCTCCTACTCTTCAAGATATAGCATTGTATTTCTTTCCATCAGAAAACAATGAAAGGTCCAGAAAGAACTTACATAGGGTATTGAAGTTTATGAATGATGAAAACTCAATAATGAGAAGTTTTATTGATGGAGTGGAGTTGTTGGTCTTTACTTCATATCAACTTGACGAGAATTCAAGGGGGACTGTTGCTGCCGTGCATGAAGGACATTTTCTGTGGGGAATTTTCCGCAGGTCAAATAAATCTGATACTGCTAACAAAAGATTACCCGCTGAGACGGATCCCGTTGATTCTGATGTCGATATGGATATTGATATGGTGGGAGGAAATGATGTGGGAAGAATTGACAGTGTTGTTAATGACAATCTGAGGAGTCCCTCTCAGTTGCCTTTTGAAGGAACAACTCTTCAGAGCACCAGTTCTAAGAAggtagaagaaaagaaaatcaaacttgagcATTCTTTTGACTCATCATCGAGCCCAGTCAAGTATCGTAAAGTGCATGACCTACTTGGTGTTCCACCAGGCTTTGAACCTCGTGGATTTGGTGCTGCAAAACCTTCAAATATTAAGAGATGA 1704 0.3709 MWFDFLLLQVEPCDVCGAVGFGEIIVTCSKCKLTREHLYCMRNNLMEVPDYWLCETCESKSGSTSSCIVKQDSGLQASRRQHSVRKGPLGKVKYLDVDEVLKLSGGNFTVKPTPSRSSLSMSRMASPGSSNFRMTGRDFVASKSVIPKNPSLTLKPNPRISSTAHWKFPRNGVKKNPMIDQRASPSIGEKQNNLRLCFSAITTIIFIVTLCDIFIIVHIVGPAKANKLVSQRRVSAPIPDRKLQPLKVQTLDRQREKPTKGEPYKDLSVTKSSPAVVSDAVAESNRFNTEGSKNKNIYEDVHRDFKYLPSSIHAWSGQFQILQKAASGEFYDGFEAQPPCIVHRKAYILSNKMPSVLQLESLSASNVLTDVFQNYSPTLQDIALYFFPSENNERSRKNLHRVLKFMNDENSIMRSFIDGVELLVFTSYQLDENSRGTVAAVHEGHFLWGIFRRSNKSDTANKRLPAETDPVDSDVDMDIDMVGGNDVGRIDSVVNDNLRSPSQLPFEGTTLQSTSSKKVEEKKIKLEHSFDSSSSPVKYRKVHDLLGVPPGFEPRGFGAAKPSNIKR 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00566 567 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 7 83 IPR013083 -
Tsu03g00566 567 PANTHER ZINC ION-BINDING PROTEIN 4 529 - -
Tsu03g00566 567 MobiDBLite consensus disorder prediction 498 518 - -
Tsu03g00566 567 MobiDBLite consensus disorder prediction 498 515 - -
Tsu03g00566 567 SUPERFAMILY FYVE/PHD zinc finger 11 59 IPR011011 -
Tsu03g00566 567 PANTHER - 4 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00566 Tsu-Chr3 4827137 4832422 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00566 - - mtr:MTR_3g025330 648.662