Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00561 atGGAAGGGTTAGTGAGTTATGGGATCAACCCAGTTCGTGTTATTTCCACTACAAAACAATATCAATCTCGTTTTCTTTGTCATTCACAATCAAATCTGAAAAAGGGTGTTCTTGGATTTCAAATTGGGATGCTGAATAACAAAAAGAATCAGTTTTTACCTTTGATCATGTCTGCTTCTGCTGTTGGAAACTCCTCTCAACTTGGTCATTTTGAGAACACTCTTCCTTCCAAAGAAATTCTGGAGCTATGGAAGAATGGTGATGCAGTGTGCTTTGATGTCGATAGCACTGTGTGTCTTGATGAAGGAATTGACGAGCTTGCTGAATTTTGTGGCGCTGGAAAAGCTGTTGCAGAATGGACAGCAagAGCAATGGGTGGTTCTGTTCCTTTTGAGGAAGCCTTGGCAGCTAGGTTATCTTTGTTCAATCCCTCTTTGTCTCAACTTCAGAATTTTCTTCAGCAAAGGCCACCAAGGCTCTCTCCTGGCATTGAAGAGTTGGTCCAGAAACTAAAGGCTAATCACAAGCATGTTTATCTGATCTCCGGGGGCTTTCGTCAAATGATCAATCCTGTTGCTTCGATACTCGGGATTCCACAAGAGAACATTTTTGCCAACCAACTGCTTTTCGGAAGCTCTGGACAGTTTCTGGGATTTGATGAAAATGAGTATACTTCAAGGAGTGGAGGAAAAGCCACCGCAGTCGAACAAATCAAGAAGGATCATGGGTACAAAGCATTGACTATGATCGGGGATGGTGCAACTGATTTTGAGGCTCGTAGACCGGGTGGTGCCGACTTGTTTGTTTGCTATGCTGGTGTTCAACTTCGAGAAGCCGTTGCTGCAAAAGCTGATTGGctagttttcaattttcaagacCTTATAAATTCATTGGGGTaa 900 0.4189 MEGLVSYGINPVRVISTTKQYQSRFLCHSQSNLKKGVLGFQIGMLNNKKNQFLPLIMSASAVGNSSQLGHFENTLPSKEILELWKNGDAVCFDVDSTVCLDEGIDELAEFCGAGKAVAEWTARAMGGSVPFEEALAARLSLFNPSLSQLQNFLQQRPPRLSPGIEELVQKLKANHKHVYLISGGFRQMINPVASILGIPQENIFANQLLFGSSGQFLGFDENEYTSRSGGKATAVEQIKKDHGYKALTMIGDGATDFEARRPGGADLFVCYAGVQLREAVAAKADWLVFNFQDLINSLG 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00561 299 CDD HAD_PSP_eu 88 291 - -
Tsu03g00561 299 TIGRFAM HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 89 260 - -
Tsu03g00561 299 Gene3D - 151 298 IPR023214 -
Tsu03g00561 299 PANTHER PHOSPHOSERINE PHOSPHATASE 62 298 - -
Tsu03g00561 299 Pfam haloacid dehalogenase-like hydrolase 90 259 - -
Tsu03g00561 299 SUPERFAMILY HAD-like 79 298 IPR036412 -
Tsu03g00561 299 PANTHER BNAA06G12800D PROTEIN 62 298 - -
Tsu03g00561 299 Gene3D Phosphoserine phosphatase; domain 2 100 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00561 Tsu-Chr3 4758702 4764080 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00561 K01079 - gmx:100789869 463.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu03g00561 03 4758702 4764080 Tsu03g00561 03 4758702 4764080 ECH