Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu03g00551 ATGTCTAGAAAGTCCATTAAAATTTCAGACGATTCCATGGAAGGGGACAAACAAAAGAATGTCCACAAACATGCAAGTGACTCAAGTTTGCTTATTCCTCAGCTAGGTTATGATACCTCCATCATTTGTCTTGCTCGATTGTCAAGGTCTGATTATGGCTCAATTGCTGTATTGAACCAAAGTTTTCGATTGCTCATTAAGAATGGAGAACTGTATCAACTTCGACGACAAATGGGAATAATTGAACATTGGATCTATTTTTCTTGTGAAGTCCTTAAATGGGTAGCTTTCGATCCAAATCGTGGTCGGTTGATGCAATTGCCTAAATTGAGTTCTGATCCATGCTTTATGCATTCAGACAAGGAGTCATTAACTGTTGGTACAgaccttcttgtttttggaaGGGAAATAACGGGTCCTGCCATCTATAAGTATAGCATTCTAACAAATTCATGGTCGAAGGGAATGAAAATGAATACTCCAAGATGTTTGTTTGGTTCTGCAAGTGTGGGAGAAATAGCAATATTAGCTGGTGGTTGTGATCAACATGGCAACATCTTGAGCTCTTCTGAGCTTTATAATTCAGATATTGGCACTTGGGAGGTTCTTCCAGACATGAACACGCCAAGGAGAATGTGTTCTGCTGTGTTTATGGATGGAAAATTTTATGTCCTTGGCGGGGTTGGAGTTGACAAAACAACACAGTTAACATGTGGTGAGGAGTTTGATTTTCAGACAAGAAAGTGGAAAAGAATTCCTAATATGTACCCTTCTCGAAACGGAGGAGATGCTGCAAATCTGGTTAGGGGTGAGGCACCTCCTTTAATTGCAGTTGTAAACAATGTATTATTTGCTGCTGATTATGCACAACATGTAGTAAAAAGATATGTTAAAGATATAAACTCATGGGTCACCATTGGAAGCCTTCCCGATCGAGTAACCTCGTTAGATGGATGGGGAGTGGCCTTTAAATCATGTGGAGATAAGCTAGTTGTCTTTGGAGGTCCTTGTATTCATGGTGAAAAGACAACAGAAGTCAATGCTTGGGTAGTAGACGAAGGTGCACCGCAGTGGAATTCACTTGCGATAATTCAATCTGGGCGCTTTGTGTATAATTGTGCTGTGATGGGATGTTGA 1137 0.3967 MSRKSIKISDDSMEGDKQKNVHKHASDSSLLIPQLGYDTSIICLARLSRSDYGSIAVLNQSFRLLIKNGELYQLRRQMGIIEHWIYFSCEVLKWVAFDPNRGRLMQLPKLSSDPCFMHSDKESLTVGTDLLVFGREITGPAIYKYSILTNSWSKGMKMNTPRCLFGSASVGEIAILAGGCDQHGNILSSSELYNSDIGTWEVLPDMNTPRRMCSAVFMDGKFYVLGGVGVDKTTQLTCGEEFDFQTRKWKRIPNMYPSRNGGDAANLVRGEAPPLIAVVNNVLFAADYAQHVVKRYVKDINSWVTIGSLPDRVTSLDGWGVAFKSCGDKLVVFGGPCIHGEKTTEVNAWVVDEGAPQWNSLAIIQSGRFVYNCAVMGC 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu03g00551 378 SUPERFAMILY Kelch motif 91 375 IPR015915 GO:0005515
Tsu03g00551 378 Gene3D - 73 377 IPR015915 GO:0005515
Tsu03g00551 378 MobiDBLite consensus disorder prediction 1 21 - -
Tsu03g00551 378 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 14 378 - -
Tsu03g00551 378 SMART kelc_smart 129 172 IPR006652 GO:0005515
Tsu03g00551 378 SMART kelc_smart 221 269 IPR006652 GO:0005515
Tsu03g00551 378 SMART kelc_smart 173 220 IPR006652 GO:0005515
Tsu03g00551 378 Pfam Kelch motif 209 255 IPR006652 GO:0005515
Tsu03g00551 378 Pfam Kelch motif 161 207 IPR006652 GO:0005515
Tsu03g00551 378 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 14 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu03g00551 Tsu-Chr3 4649147 4650283 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu03g00551 30 254 Miscellaneous Gene Families AT4G33900 28.085 2.16e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu03g00551 - - cam:101513734 550.436