Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05493 ATGGAGGAAAGTAGCAACAATAGAGGTGAATTTCAAGCTAGTTTAGCTAAACTTTCATCATTGAGGTCAGGTGGAAGTTTTAAATCAACATTATCGGGAAGAACAACTCCGCGAAGTAATTCTCCTTCGTTTCGGAGATTAAATACTAGTCGTACGCCGAGAAAAGAAGGAAGGGGTCTTGGTGGTTCAGTGTTGTTTCGGAGCAATCGTGTGTTATTGTGGTTGCTTCTAATTACCCTATGGGCTTATCTTGGATTTTTTGTTCAGTCTAGGTGGGCACATAGTGATAAGAAAGAAGAATTTTCTGGTTTTGGAACCGGGCCAAGAAATATTGGTGTAGATGCTGATCCGAGTCTTCGTCGTGATTTGATTGCTAGTGAGGACTCGTTGTCTGTTAATAATGAGACAATTAGAAATAAAGGAGGGATTGGTAGAACAATAAATGTAGCTTTggcaaagaaagaaaatgatgatgatggtgatgttcCATCTCCGAAAGGTAAAGCAAGctcgaagaagaagaagaagagcaaGCGATCTTCGAGAGGTAAAGCTCGTGGTAAGAAGAAACCAACAGTGGAAGTTAAGAACAATGATATAGAGGAGCAGGAACCTGAAATACCTCAAACAAATAGTACATATGGATTACTCGTTGGACCATTTGGTTCAACGGAAGATAGGATTTTGGAATGGAGTCCTCAGAAACGTTCCGGGACATGTAATAGGAAGGGGGACTTTGCACGTCTTGTTTGGTCCAGAAGATTTATCTTGATATTCCACGAGCTTTCCATGACCGGAGCTCCACTCTCAATGTTGGAATTGGCAACAGAACTTTTGAGCTGTGGTGCCACTGTTTCAGCTATTGCACTTAGCAAGAAGGGTGGTTTGATGTCAGAGCTTTCTAGAAGACGAATCAAGGTGCTTGAGGACAAAGCAGATCTCAGCTTCAAAACTGCAATGAAGGCCGATCTTGTAATTGCTGGTTCAGCTGTATGTGCATCATGGATTGaaaaatatattgaacGGTTCCCTGCTGGAGCGAGCCAAGTTGCTTGGTGGGTCATGGAAAACCGTAGAGAGTACTTTGACCGTTCAAAGGGTGTCTTGCACAGAGTAAAGATGTTGGTTTTTCTTTCTGAATCACAATCTAAACAATGGCAAAAATGGTGTGaagaagaaaacataaaactGCGATCACAGCCTGAAATTGTTCCTTTGTCTGTTAATGATGAACTGGCATTTGTAGCCGGCATTTCTTCTACACTTAATACTCCGTCCTTTAGTACTGATAAAATGATTGAGAAAAGGCATTTGTTACGAGAATCGGTCCGAAAAGAAATGGGATTAACCGATAATGATATGCTTGTGATATCTCTGAGTAGCATCAACCCTGGAAAGGGCCAGCTATTGCTTCTTGAATCAGCAAGCTCAGTAATAGAACAAGGACTGTtgcaagatgaaaagaaaatgaaaaaattatcaaatataaagGAAAACTTGTCTACTATGACTAGAAAACGTCGTATTAGAAAATTGTTACCATTGTTGAAAGATGGCAAAGTAGCAAGCAATTCTTTAAGCAGAAGGAAACAATTGTTGGCTAATAACAAAGAAACAATGCAACAATCTCTCAAAGTTCTCATTGGTTCTGTTGGATCTAAGAGTAACAAAGGGGATTATGTTAAAAGTCTTCTGAGTTTCTTAGAACAGCATCCAAACACTTCGAAATCAGTTTTGTGGACTCCAGCCACCACACAGGTTGCCTCACTATACTCTGCTGCAGATGTTTATGCCATAAACTCTCAGGGACTTGGAGAGACATTCGGACGGGTGACTATAGAAGCAATGGCATTTGGTCTTCCGGTTCTTGGAACGGATGCCGGGGGAACGAAGGAGATAGTTGAGCACAACATTACAGGTCTTCTTCATCCAATTGGACGTTCAGCAGGGAACGACGTCCTTGCACAGAATCTTCTGTATTTGCTTAAAAACCAGTTGGCAAGGAAGCAAATGGGGATAGAAGGCAGGAAAAAAGTGGAGAGGATGTATTTGAAGCAACACATGTATAAGaaatttgttgatgttattgtTAGGAAGAGCAAGCCAAAGATCACAACACAAGTTCTTTTTCAAGCATTTCTTTGCGGATTATTCGGGGCAAGCTTACAACAAAATTTGTACGCGGAAGCAGTGATATTGTCAGGTGTAACATATGCTACGGTCATGTTTAACCTTATTCCTGCTGTTACCTTCATCTTAGCAATCTGTTTTGGATTGGAAAGGTTGAAGATTGGAACATTAACGGGAAAGGCCAAAGTGATTGGCACTTTAATGGGAATTAGTGGAGCCATGATTCTCACATTCTATAAGAGCATTGAAATTCACCTATGGTCTACTCATGTGAATTTGTTGAAACATACACATCCACAAAATGTGTCTGCTCATAGTATTTGGGGCTCTTTTCTTGCCTTAGGCACttgtttatcattttcaatATGGTTAATAATTCAGGCTAAGATGAGTGAGAAATTTCCTTGGCATTATACAAGTGCAGCTTTGATGTCAGTGATGGCTTCCATTCAATCAATTATATATGCTTTATGTATGGAAAGAGGTGATTGGAATCAATGGAAGATTGGCTGGGATATCAAACTTTTCGCTGCGGTTTTTTCGGGGTTTGTGGCCTCTGGAATAGTTTGGGTTTCAATTGCATGGTGTGTGCGCATAAAAGGCCCACTTTATGCTTCTGTTTTCAACCCCCTCTTCCTTGTTCTAGTGGCCATTGGAGGGTCTCTCCTATTAGATGAAAAGCTCTATTTGGGAAGTGTAATAGGATCATTGATAATTGTGATCGGACTATACTTTGTCTTGTGGGGTAAAGGTAGAGAATTGAAGAAAATTATTGAGCAAAAGCAAACAAAAGACTTGGTGGAGGATCAACCATTGGAGGTAATTGCCACAAAgcttgaagatgaagatgataaaAGTGTTGAAATTGAGGCTTTGTCTCCTACCATGCATGAGTTACAACAATTTGTTATAGCTGTTAGATAG 3054 0.3844 MEESSNNRGEFQASLAKLSSLRSGGSFKSTLSGRTTPRSNSPSFRRLNTSRTPRKEGRGLGGSVLFRSNRVLLWLLLITLWAYLGFFVQSRWAHSDKKEEFSGFGTGPRNIGVDADPSLRRDLIASEDSLSVNNETIRNKGGIGRTINVALAKKENDDDGDVPSPKGKASSKKKKKSKRSSRGKARGKKKPTVEVKNNDIEEQEPEIPQTNSTYGLLVGPFGSTEDRILEWSPQKRSGTCNRKGDFARLVWSRRFILIFHELSMTGAPLSMLELATELLSCGATVSAIALSKKGGLMSELSRRRIKVLEDKADLSFKTAMKADLVIAGSAVCASWIEKYIERFPAGASQVAWWVMENRREYFDRSKGVLHRVKMLVFLSESQSKQWQKWCEEENIKLRSQPEIVPLSVNDELAFVAGISSTLNTPSFSTDKMIEKRHLLRESVRKEMGLTDNDMLVISLSSINPGKGQLLLLESASSVIEQGLLQDEKKMKKLSNIKENLSTMTRKRRIRKLLPLLKDGKVASNSLSRRKQLLANNKETMQQSLKVLIGSVGSKSNKGDYVKSLLSFLEQHPNTSKSVLWTPATTQVASLYSAADVYAINSQGLGETFGRVTIEAMAFGLPVLGTDAGGTKEIVEHNITGLLHPIGRSAGNDVLAQNLLYLLKNQLARKQMGIEGRKKVERMYLKQHMYKKFVDVIVRKSKPKITTQVLFQAFLCGLFGASLQQNLYAEAVILSGVTYATVMFNLIPAVTFILAICFGLERLKIGTLTGKAKVIGTLMGISGAMILTFYKSIEIHLWSTHVNLLKHTHPQNVSAHSIWGSFLALGTCLSFSIWLIIQAKMSEKFPWHYTSAALMSVMASIQSIIYALCMERGDWNQWKIGWDIKLFAAVFSGFVASGIVWVSIAWCVRIKGPLYASVFNPLFLVLVAIGGSLLLDEKLYLGSVIGSLIIVIGLYFVLWGKGRELKKIIEQKQTKDLVEDQPLEVIATKLEDEDDKSVEIEALSPTMHELQQFVIAVR 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05493 1017 CDD GT4_PimA-like 256 696 - -
Tsu02g05493 1017 PANTHER BNAA05G14870D PROTEIN 1 699 - -
Tsu02g05493 1017 Pfam Glycosyl transferases group 1 532 677 IPR001296 GO:0016757
Tsu02g05493 1017 Gene3D Glycogen Phosphorylase B; 428 683 - -
Tsu02g05493 1017 MobiDBLite consensus disorder prediction 169 186 - -
Tsu02g05493 1017 Pfam EamA-like transporter family 818 957 IPR000620 GO:0016020|GO:0016021
Tsu02g05493 1017 Pfam Glycosyl-transferase family 4 251 420 IPR041693 -
Tsu02g05493 1017 SUPERFAMILY Multidrug resistance efflux transporter EmrE 864 962 - -
Tsu02g05493 1017 MobiDBLite consensus disorder prediction 154 214 - -
Tsu02g05493 1017 MobiDBLite consensus disorder prediction 187 203 - -
Tsu02g05493 1017 PANTHER BNAA05G14870D PROTEIN 1 699 - -
Tsu02g05493 1017 MobiDBLite consensus disorder prediction 17 48 - -
Tsu02g05493 1017 MobiDBLite consensus disorder prediction 154 168 - -
Tsu02g05493 1017 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 261 695 - -
Tsu02g05493 1017 MobiDBLite consensus disorder prediction 17 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05493 Tsu-Chr2 63257011 63266278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g05493 25 702 Glycosyltransferase AT3G15940 61.095 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05493 - - mtr:MTR_2g102283 1208.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05493 02 63257011 63266278 Tsu06g00259 06 2160327 2163605 PCT