Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05482 atgaAAATCTCAAAAGAAACATCATGTTACTCTTACACACATCTCCTATGGCCATGTCAACCTCGTACAGATGAAAATCACATAGTTTTTTCCAACCGTTTTCGTGTCACCTGCACGGTGAGTCTTCTACTCTTATTCACCACCGTGTACGTTTTCTGGCCGTCAGATCCATATCTCAAGATCGTACGGTTAAAACTGCAGAAGATTAAGATACATCGTGTACCGCGTATCACCGTAGATATTTCCATGCTCCTCACGTTGAGAGTGCAAAATGCTGACGTGTATTCAATGGACTTTGGAGCAGTTGACGTGGCGGTATCTTATAGGGGGAAACCATTAGGTCACGTGACGTCGGAGAATGGGCACGTGAGGGCCATGGGATCTTCGTTTGTGGATGCTGACTTGGAGTTTGCTGGCATTGGTGTGTTGCCGGAGATAGTGTTTTTGTTGGAGGATCTGGCTAAGGGTACGGTGCCATTTGATACGGTTAGTCAAGTTAAGGGCAAAATGgggattctatttttttattttcctatcaAGGCCAAACTATCAATGTGA 558 0.4283 MKISKETSCYSYTHLLWPCQPRTDENHIVFSNRFRVTCTVSLLLLFTTVYVFWPSDPYLKIVRLKLQKIKIHRVPRITVDISMLLTLRVQNADVYSMDFGAVDVAVSYRGKPLGHVTSENGHVRAMGSSFVDADLEFAGIGVLPEIVFLLEDLAKGTVPFDTVSQVKGKMGILFFYFPIKAKLSM 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05482 185 SUPERFAMILY LEA14-like 48 151 - -
Tsu02g05482 185 PANTHER EXPRESSED PROTEIN 8 184 - -
Tsu02g05482 185 Gene3D - 55 185 - -
Tsu02g05482 185 Pfam Late embryogenesis abundant protein 86 175 IPR004864 -
Tsu02g05482 185 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 8 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05482 Tsu-Chr2 63132489 63134428 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05482 - - cam:101505811 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05482 02 63132489 63134428 Tsu02g05482 02 63132489 63134428 ECH
Tsu02g05482 02 63132489 63134428 Tsu06g00277 06 2300924 2302983 PCT