Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05313 ATGAAGGTTAAAGCTGGGTTTAGTGTGTGGCCTAATGTGAGACAACTTTGCTTTAGAAAAGGAATTTTGTATGGATTTATGCGACTTTTTTCTACTCCATATAAAACACTGCGCGGGGGAGCTAGTCGTTCACTCAAAGTGGCTCGATTTTGCAGTGTTGCGAATATGTCTTCCTCATTGCAGATTGAATTGGTACCTTGTCTGAGTGACAATTATGCATACCTTTTACACGATGTTGATACGGGCACAGTTGGAGTTGTTGATCCTTCTGAAGCTTCGCCTGTCATAGATGCATTGAGCAAGAAAAATCGGAACTTGAATTACATACTCAATACTCACCATCATCATGATCACACTGGTGGAAATGTAGAACTAAAAGCAAGATATGGGGCAAAGGTGATTGGTTCAGGGACTGACAAGGAAAGGATTCCAGGCATTGATATCCATTTGAAAGATGGTGATAAGTGGATGTTTGCTGGCCATGAGGTGCATGTAATCGACACACCTGGTCACACTCGAGGTCACATAAGCTTCTACTTTCCGGGATCGGGAACAATCTTTACAGGGGACACTTTGTTCAGCTTATCATGCGGAAAACTCTTTGAAGGAAGCCCTGAACAGATGCAATCTTCTCTTAGAAAGATCATGTCTTTACCAGACGATACAAGTATATACTGTGGACATGAGTACACATTGAATAATACAAAGTTTGCATTGGCTGTCGAACCTGAAAACAAGGATCTTCAATCCTATGCTGCCCATGTGGCAAACCTTCGAAGTAAAGGCTTGCCCACAATTCCAACCATACTGAAGTTAGAAAAGGCTTGCAATCCATTTCTTCGCACATCTAGTGCCCAAATCCGACAATCGTTAAACATTCCAGTCACCGCAAATGATGCAGAAGCCCTGGGGATCATCCGGCAAGCAAAGGAtgatttttag 942 0.4225 MKVKAGFSVWPNVRQLCFRKGILYGFMRLFSTPYKTLRGGASRSLKVARFCSVANMSSSLQIELVPCLSDNYAYLLHDVDTGTVGVVDPSEASPVIDALSKKNRNLNYILNTHHHHDHTGGNVELKARYGAKVIGSGTDKERIPGIDIHLKDGDKWMFAGHEVHVIDTPGHTRGHISFYFPGSGTIFTGDTLFSLSCGKLFEGSPEQMQSSLRKIMSLPDDTSIYCGHEYTLNNTKFALAVEPENKDLQSYAAHVANLRSKGLPTIPTILKLEKACNPFLRTSSAQIRQSLNIPVTANDAEALGIIRQAKDDF 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05313 313 PIRSF Glx 55 313 IPR017782 GO:0004416|GO:0019243
Tsu02g05313 313 CDD hydroxyacylglutathione_hydrolase_MBL-fold 65 228 IPR035680 -
Tsu02g05313 313 Pfam Hydroxyacylglutathione hydrolase C-terminus 229 313 IPR032282 -
Tsu02g05313 313 Pfam Metallo-beta-lactamase superfamily 73 228 IPR001279 -
Tsu02g05313 313 PANTHER BETA LACTAMASE DOMAIN 2 313 - -
Tsu02g05313 313 Gene3D - 60 313 IPR036866 -
Tsu02g05313 313 SMART Lactamase_B_5a 70 228 IPR001279 -
Tsu02g05313 313 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 2 313 - -
Tsu02g05313 313 Hamap Hydroxyacylglutathione hydrolase [gloB]. 60 313 IPR017782 GO:0004416|GO:0019243
Tsu02g05313 313 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 63 313 IPR017782 GO:0004416|GO:0019243
Tsu02g05313 313 SUPERFAMILY Metallo-hydrolase/oxidoreductase 60 311 IPR036866 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05313 Tsu-Chr2 61799522 61803600 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05313 K01069 - gmx:100819370 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05313 02 61799522 61803600 Tsu02g05313 02 61799522 61803600 ECH
Tsu02g05313 02 61799522 61803600 Tsu02g02269 02 22862680 22867221 PCT