Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05304 ATGGCGTCAAGCAATGGCATCCCAACAACAGGCAAAGGACTAATCGTAAGTTTCGGTGAGATGCTCATCGACTTCGTCCCAACAGCTTCCGGCGTATCACTCGCAGAAGCACCAGGCTTCCTTAAAGCACCCGGAGGAGCACCGGCAAACGTTGCAATCGCAATCACAAGACTCGGTGGTAAATCAGCTTTCGTCGGTAAACTTGGAGACGATGAATTCGGTCACATGCTCGCCGGGATCTTGAAAGAAAACGACGTTAAAACCGATGGTATAACTTTTGATGAAGGTGCAAGAACTGCTTTGGCTTTTGTTACTTTACGCGCTGATGGAGAGCGTGAGTTTATGTTTTATAGAAATCCTAGTGCTGACATGCTTCTTAAACCTGAAGAACTTAATCTCGAACTCATCAGATCTGCAAAAGTTTTCCACTATGGATCAATAAGCTTGATTGTTGAGCCATGCAGATCAGCACACTTGAAGGCATTGGAAGTGGCCAAAGAGGCTGGCTGCCTTCTATCCTATGATCCAAACCTCCGTCTACCCTTGTGGCCCTCTGCCGATGAAGCTCGCAAACAAATACTGAGCATATGGGAAAAGGCTGATTTGATCAAGGTTAGTGATAATGAGCTGGAGTTCTTGACTGGAAGTGACAAAATTGATGATGAGACTGCTTTGACATTGTGGCACCCCAATTTGAAGTTGCTTCTCGTCACTCTTGGTGAACATGGCGCAAAATACTACACCAAGAATTTCCGTGGAACAGTAGAAGCATTCCATGTCAATACAGTTGATACAACCGGTGCCGGTGATTCCTTTGTTGGTGCTCTGTTGGCCAAGATTGTTGATGATCAGTCCATACTAGAAGATGAACCAAGATTAAGAGCAGTACTTAAGTTTGCAAATGCATGTGGAGCAATCACAACTACTAAAAAGGGAGCAATTCCTGCTCTTCCCAAGGAGGAGGATGCACTGAAGCTGCTCAATGCATAG 990 0.4535 MASSNGIPTTGKGLIVSFGEMLIDFVPTASGVSLAEAPGFLKAPGGAPANVAIAITRLGGKSAFVGKLGDDEFGHMLAGILKENDVKTDGITFDEGARTALAFVTLRADGEREFMFYRNPSADMLLKPEELNLELIRSAKVFHYGSISLIVEPCRSAHLKALEVAKEAGCLLSYDPNLRLPLWPSADEARKQILSIWEKADLIKVSDNELEFLTGSDKIDDETALTLWHPNLKLLLVTLGEHGAKYYTKNFRGTVEAFHVNTVDTTGAGDSFVGALLAKIVDDQSILEDEPRLRAVLKFANACGAITTTKKGAIPALPKEEDALKLLNA 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05304 329 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 264 277 IPR002173 GO:0016773
Tsu02g05304 329 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016773
Tsu02g05304 329 Pfam pfkB family carbohydrate kinase 14 319 IPR011611 -
Tsu02g05304 329 Gene3D - 12 329 IPR029056 -
Tsu02g05304 329 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Tsu02g05304 329 PRINTS Ribokinase signature 195 210 IPR002139 GO:0016301
Tsu02g05304 329 PRINTS Ribokinase signature 235 246 IPR002139 GO:0016301
Tsu02g05304 329 SUPERFAMILY Ribokinase-like 15 326 IPR029056 -
Tsu02g05304 329 PANTHER HEXOKINASE FAMILY MEMBER 20 319 - -
Tsu02g05304 329 PANTHER BNAA04G18320D PROTEIN 20 319 - -
Tsu02g05304 329 CDD bac_FRK 14 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05304 Tsu-Chr2 61756908 61760351 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05304 K00847 - gmx:100803713 600.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05304 02 61756908 61760351 Tsu02g05304 02 61756908 61760351 ECH
Tsu02g05304 02 61756908 61760351 Tsu02g02251 02 22539322 22542781 PCT