Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05289 ATGGGGGTTATGTCCAGGCGGGTTGTCCCCGCCTGTGGTAACCTCTGTGTTTTTTGTCCTTCTTTGCGAGCAAGATCAAGACAACCTGTCAAACGTTACAAGAAGTTGATTGCCGATATCTTACCCCGTAATCAGGCTGCTCAACTCAATGATAGGAAAATTGGAAAGTTATGTGAGTATGCTTCTAAGAATCCATTGAGAATTCCCAAGATTACAGAGAACTTGGAGCAAAGGTGTTACAAGGATTTGCGTAATGAAAACTTTGGTTCTGTGAAAGTTATCTTGTGCATATACAGAAAATTGCTGTCGTCATGTAATGAGCAGATACCACTATTTGCCAGTAGTTTATTAGGGATCATTCGGACTCTTCTTGAGCAAACTCGAGCAGATGAAGTGCGGATCTTAGGTTGCAATACTCttgtagattttatttatttccagACAGATGGTACATACATGTTCAACTTAGAGGGTTTTATCCCGAAACTATGTCAATTGGCTCAAGAAGTGGGAGATGATGATCGAGCTCTGCTTCTACGCTCAGCTGGACTACAAGCTCTATCTTCTATGGTAAAGTTCATGGGTGAGCAGTCACATCTTTCCATGGATTTTGACAAAATTATATCAGCAATTTTGGAGAATTATATGGACCTTCAATCCAAATCCAACCTTGCCAACATAGGGAAACTGAATTCACAATCTCAGAACCAATTAGTTCAAGGATTTCCTAAAGAAGAAGACCATATATCTTCCGCGTTGACTGTTGCTACAGGATTTGATACAGAGTCCAAGTTGGATAATGATAAGAATCCTGCTTATTGGTCAAAGGTTTGCTTGTATAATATAGCTAAGTTGGCAAAGGAAGCTACGACGGTGCGGCGTGTCCTGGAACCactttttcattattttgataCTGAGAATCACTGGTCTTCTGAGAAGGGCGTTGCTTATTGTGTTTTGATGTATTTGCAATCCCTTTTAGCTGAATCGGGAAATAACTCCCATCTTCTGTTGTCCATATTGGTCAAGCACCTGGATCATAAAAATGTTGTGAAGAAACCTATCCTTCAGATTGATATTATTAACATCACCACACAGGTTGCACACAATGTGAAGCAGCAAGCCTCAGTTGCACTCATTGGTGCAATATCTGATCTCATTAAACATTTAAGGAAATGCCTACAAAATTCAGCTGAAGCATCCGGCATTGGAAATGGTGCATTCAACTTTAATACTAAACTTCAATCTGCCATTGAAATGTGCATATTACAACTTTCAAACaagGTTGGAGATGCAGGACCCATTCTTGATTTGATGGCTGTAGTGCTAGAGAATATTTCGAGTTCTACTATCATAGCAAGAACAACAATATCTGCTGTCTATCAAACTGCAAAGATAATCATTTCTGTCCCTAATGTGTCATATCACAAGAAGGCTTTCCCTGATGCGTTGTTTCATCAATTACTCCTGACCATGGCTCATCTTGACCGTGAAACACAAATTGGAGCGCACAGTGTCTTCTCTGTGGTGCTTGTGCCATCCATGGTTTCTCCTTGGTTAGACCAAAAAAAGATTGCTAAGAAGGTAGTGAGTGAAAGCCTCTCCATTCAGCATGGAAGTTTTTCTAGAGCTGAGCACTTAAACGGGAAACTGGTAGAAGAAAAGGTAATAGCAGGTGTGAGCGGAAATAAAATTTTCACTCGTGCTCTAACTGATCGAAAAGATGATCCAAGATCTCTTAGGTTGAGCAGTCACCAAGTGAGTCTTTTGCTTTCTTCAATCTGGGTTCAGGCAACATCTGCTGAAAATGGCCCTGCAAACTATGAGGCAATGGCGCACACTTATAGCATTGCTTTATTATTTACTCGTTCTAAGACATCCAGTTACATGGGTTTAGTAAGATGCTTCCAACTGGCATTTTCCCTTAGGAGCATATCTTTGGACCAAGAAGGAGGCTTACCACCATCTCGCAGGAGGTCCCTTTTATCCTTGGCTTCGCACATGCTTGTATTCTCTGCCAGGGCAGGCAATTTCCCTGATCTGATTCCCAAAGTCAAAGCATCCCTGACAGTAGATCCTTTTCTTGAATTGGTGGATGATACCCTGCTGCGGACTGTTTGTCTAAAATCAGACAAGATAATTTATGGATCTGAGGAAGATGAAGTTGCTGCTATGAAGTCACTATCAGCTGTACAATTGGATGACAGACAGTTGAAAGAGACTGTAACATCATACTTTATGactaaattttcaaaattgcCGGAGGATGACTTGTCCAGCATAAAAAACCAACTTCTACAGGGTTTTTCTCCTGACGATGCTTATCCATCGGGACCTCCATTGTTTATGGAGACACCAAGGCCAGGTTCTCCACTTGCTCAGATAGAGTTCCCTGATTTTGACGAGATAATGGCTCCAGGTGATTTGATGGATGAAGAACCTGAATTAAGTGGAAGCCATTCAGATCGCAGAACATCACTTTCAACCAACTGTCCAGATGTTCTAGGTGTTAATCAACTTTTGGAATCGGTTTTGGAAACTGCTCGGCAAGTTGCAAGCGTATCCACTTCCTCAACTCCTTTACCTTATGACCAAATGAAGAACCAGTGTGAGGCCCTTGTAACAGGGAAACAACAGAAGATGTCAACCATTTACAGTTTTAAGCACCAAGAGGACACCAAGGCCATAGTTCTTTCTAGTGAAAATGAAGTAGAAGTTTCCCGTCAACCTTTTAAGGCACTAGAGTATTCAAAAGGCGATTTGAAGTTGGTAGCTCAGGAGCAATTTCAAGCACAGGATCACGTCCGCTTCCTTTCACACGACACTAGACAGCATCATTCTTTGAGACTTCCACCTTCAAGCCCCTATGATAAATTTTTGAAAGCTGCAGGATGCTAA 2898 0.4086 MGVMSRRVVPACGNLCVFCPSLRARSRQPVKRYKKLIADILPRNQAAQLNDRKIGKLCEYASKNPLRIPKITENLEQRCYKDLRNENFGSVKVILCIYRKLLSSCNEQIPLFASSLLGIIRTLLEQTRADEVRILGCNTLVDFIYFQTDGTYMFNLEGFIPKLCQLAQEVGDDDRALLLRSAGLQALSSMVKFMGEQSHLSMDFDKIISAILENYMDLQSKSNLANIGKLNSQSQNQLVQGFPKEEDHISSALTVATGFDTESKLDNDKNPAYWSKVCLYNIAKLAKEATTVRRVLEPLFHYFDTENHWSSEKGVAYCVLMYLQSLLAESGNNSHLLLSILVKHLDHKNVVKKPILQIDIINITTQVAHNVKQQASVALIGAISDLIKHLRKCLQNSAEASGIGNGAFNFNTKLQSAIEMCILQLSNKVGDAGPILDLMAVVLENISSSTIIARTTISAVYQTAKIIISVPNVSYHKKAFPDALFHQLLLTMAHLDRETQIGAHSVFSVVLVPSMVSPWLDQKKIAKKVVSESLSIQHGSFSRAEHLNGKLVEEKVIAGVSGNKIFTRALTDRKDDPRSLRLSSHQVSLLLSSIWVQATSAENGPANYEAMAHTYSIALLFTRSKTSSYMGLVRCFQLAFSLRSISLDQEGGLPPSRRRSLLSLASHMLVFSARAGNFPDLIPKVKASLTVDPFLELVDDTLLRTVCLKSDKIIYGSEEDEVAAMKSLSAVQLDDRQLKETVTSYFMTKFSKLPEDDLSSIKNQLLQGFSPDDAYPSGPPLFMETPRPGSPLAQIEFPDFDEIMAPGDLMDEEPELSGSHSDRRTSLSTNCPDVLGVNQLLESVLETARQVASVSTSSTPLPYDQMKNQCEALVTGKQQKMSTIYSFKHQEDTKAIVLSSENEVEVSRQPFKALEYSKGDLKLVAQEQFQAQDHVRFLSHDTRQHHSLRLPPSSPYDKFLKAAGC 965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05289 965 PANTHER CYCLIN-LIKE PROTEIN 1 965 - -
Tsu02g05289 965 SUPERFAMILY ARM repeat 77 448 IPR016024 -
Tsu02g05289 965 MobiDBLite consensus disorder prediction 809 829 - -
Tsu02g05289 965 PANTHER PUTATIVE, EXPRESSED-RELATED 1 965 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05289 Tsu-Chr2 61672356 61681232 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05289 K21842 - gmx:100806860 1479.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05289 02 61672356 61681232 Tsu02g05289 02 61672356 61681232 ECH
Tsu02g05289 02 61672356 61681232 Tsu02g02237 02 22413897 22423076 PCT