Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g05222 ATGCCTCAGACAGAACGTGCTTGCAAACATGTTGATACTACAACAAGAAGTCCTAGCATTGCTACCATGGAACAATTCCTCCgagGAGGGGAATCCTCAAGGATGTCACCAACCTACTCCACCTCCCCTTCTTCCCCTTCCTCCTCTTACTTTGAGAGGGTGAAGCACCATGACCCTGAAGAAGATCAGGGCCTATATCAGAGAAAATCGGTTCTCAGCAAAGTGAAGGAGAGAGCCAAGAAATTAGTATCGCGCAACAGCCTCAGCAGGAGAAGACAGGACGAAGATAATTTTACTCCGTCTTGGGGTGTTAGTTTAGAcgatgaagaaggagaagaagaagatgctGAATACCTCGGAGCTCcaatcTATGAATCAGAGCTAGCCCCTGAAGAATACAAAGAAAATGCAAGACAACATCCAAGAGCAAATCCAGTAATCTCCGAGAAGCGCATTTTGAAGACGACGAAACCAGGAGAACAACAAGATCAACAAAATTCACTTAGTCCTGTCAAGTCCTCAACAACATCTCCTCAACTTGCAACAATAGCAACAACTACTAATAGTCCAAATCAAAACACAACAATGACTCATGAGAAACTCTCACCATCCATTGTTaataaaacaacaaaagcatTAATTCATTCTGCTTCCTCAAAACCTCATGTTACTTCTATAATTACTCCTGTTGCTCCTTTGAgtacttcatcatcatcaacaccatCTTCTCCATTGAATCATGTGAAATTTGCTACTAGCCCCAAAAGTTCAAATTATTCTCAATCATTAATGAGTCCTAGGAGAAGTTCTAATGGTATTAGTGTGATTGAGAAGTTTAAAGGAGCTGTAAATTCTTTGCTAAGAAATGATGAACAAccacaacaaaaatattatgtaaaaaGTCCTACAATACGTGCTAATTCCTCACAAATAAGCAACACTAATACTCATGAAGTTGGTCAAGGAGCAGAGAACTATGGAAGAATTCTTCAGACAAATTAA 1002 0.3653 MPQTERACKHVDTTTRSPSIATMEQFLRGGESSRMSPTYSTSPSSPSSSYFERVKHHDPEEDQGLYQRKSVLSKVKERAKKLVSRNSLSRRRQDEDNFTPSWGVSLDDEEGEEEDAEYLGAPIYESELAPEEYKENARQHPRANPVISEKRILKTTKPGEQQDQQNSLSPVKSSTTSPQLATIATTTNSPNQNTTMTHEKLSPSIVNKTTKALIHSASSKPHVTSIITPVAPLSTSSSSTPSSPLNHVKFATSPKSSNYSQSLMSPRRSSNGISVIEKFKGAVNSLLRNDEQPQQKYYVKSPTIRANSSQISNTNTHEVGQGAENYGRILQTN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g05222 333 MobiDBLite consensus disorder prediction 1 115 - -
Tsu02g05222 333 MobiDBLite consensus disorder prediction 155 200 - -
Tsu02g05222 333 PANTHER EUKARYOTIC RNA POLYMERASE II HEPTAPEPTIDE REPEAT 18 228 - -
Tsu02g05222 333 PANTHER EUKARYOTIC RNA POLYMERASE II HEPTAPEPTIDE REPEAT 238 333 - -
Tsu02g05222 333 MobiDBLite consensus disorder prediction 158 200 - -
Tsu02g05222 333 MobiDBLite consensus disorder prediction 51 97 - -
Tsu02g05222 333 MobiDBLite consensus disorder prediction 29 50 - -
Tsu02g05222 333 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 18 228 IPR037491 GO:0009737
Tsu02g05222 333 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 238 333 IPR037491 GO:0009737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g05222 Tsu-Chr2 61136167 61138278 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g05222 - - mtr:MTR_2g097710 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g05222 02 61136167 61138278 Tsu02g05222 02 61136167 61138278 ECH
Tsu02g05222 02 61136167 61138278 Tsu02g02127 02 20944518 20946420 PCT