Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04890 ATGGCGTCACGCAATTCTGAATTCTTGAAGAACTTTTGGATCCCGAATCACGTTCTCGTGCCGGATTCTAAGGTTGATGATGGTGAAATTGATGGTGATGGACCAAAGTGTCCGGTGCTTGTTTTTGTTAACTCTAAGAGTGGTGGTCAGTTAGGTGGAGAACTCTTGAAAACCTACCGTTCACTTCTCAAAGAGAAACAGGTTTTTGATTTGGGGGAAGAGACTCCTGATAAGGTTTTGAGTAGAATTTATGCTAATTTGGAAAATTTGAAGGTTCAAGGTGATCAACTTGCTATATGGACTATGGAGAGATTGAGATTGATTGTTGCTGGGGGTGATGGAACAGCTGGCTGGTTGCTTGGAGTTGTTTGTGATCTCAAATTATCTCATTCGCCTCCCATAGCCACGGTTCCTTTGGGCACAGGGAATAATCTACCATTTGCATTTGGTTGGGGGAAGAAGAACCCGGGAACAGATGAACAATCTGTTTTGTCATTTCTTGATAAAGTATTGAAGGCTAAGGAAATGAAAATTGACAACTGGCACCTTCTTATGCGGATGAAGACTCCGAAACACGGTACCTGTGATCCTATTGCTCCCCTTGAGTTACCTCATTCTCTGCATGCTTTCCATCGAGTATCTGAGTCAGACGAACTTAATATAGAAGGTTGCCATACATTTCGTGGGGGATTTTGGAATTACTTCAGCATGGGAATGGATGCTCAAGTGTCCTATGCATTTCATTCTGAACGTAAATTGCACcctgaaaaattcaaaaatcagTTGGTTAATCAGAGCACTTATGCTAAGCTCGGATGCACACAAGGATGGTTTTTAGCTTCACTAACCCATCCTCCGAACAGGAACATAGCACATATGGGAAAAGTCAAAGTCATGAAAACACCTGGTCATTGGGAAGATCTAGAAATACCTTCCAGCATCCGATCAATTGTATGCCTTAACTTGCCTAGCTTTTCTGGTGGATTTAATCCATGGGGTACACCAAACAAAAGGAGGCACCGTGATAGAGCTTTTACACCTCCATTTGTAGATGATGGTCTTATTGAAGTTGTTGGTTTTAGAGATGCGTGGCATGGACTTGTTTTACTGGCTCCAAATGGACATGGAACTCGCCTTGCTCAGGCAAAAAGAATCCGCTTTGAGTTTCACAAAGGTGCAGCAGATCATACATATATGAGGATTGATGGGGAACCTTGGAAGCAACCTCTCCCAGTTGATGATGATACTGTTTTGGTAGAGATTTCTCACCATGGCCAGGTTAACATGCTTGCTACTCATGAGTCCAAGTCTAAAAGTATGTATGATCCATCATCACCTCATCATAATGATGCTGAGGATGATGATAATGAAGAAGACAGTTTAGCAGATGAATTTCGAAAATTTGGTGCAGCAGACACTTTCAAAATCCCAGATGAGGTAGATATTGCTCATCTTAGTTAG 1461 0.4155 MASRNSEFLKNFWIPNHVLVPDSKVDDGEIDGDGPKCPVLVFVNSKSGGQLGGELLKTYRSLLKEKQVFDLGEETPDKVLSRIYANLENLKVQGDQLAIWTMERLRLIVAGGDGTAGWLLGVVCDLKLSHSPPIATVPLGTGNNLPFAFGWGKKNPGTDEQSVLSFLDKVLKAKEMKIDNWHLLMRMKTPKHGTCDPIAPLELPHSLHAFHRVSESDELNIEGCHTFRGGFWNYFSMGMDAQVSYAFHSERKLHPEKFKNQLVNQSTYAKLGCTQGWFLASLTHPPNRNIAHMGKVKVMKTPGHWEDLEIPSSIRSIVCLNLPSFSGGFNPWGTPNKRRHRDRAFTPPFVDDGLIEVVGFRDAWHGLVLLAPNGHGTRLAQAKRIRFEFHKGAADHTYMRIDGEPWKQPLPVDDDTVLVEISHHGQVNMLATHESKSKSMYDPSSPHHNDAEDDDNEEDSLADEFRKFGAADTFKIPDEVDIAHLS 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04890 486 Pfam Diacylglycerol kinase catalytic domain 38 162 IPR001206 GO:0016301
Tsu02g04890 486 ProSiteProfiles DAG-kinase catalytic (DAGKc) domain profile. 34 187 IPR001206 GO:0016301
Tsu02g04890 486 Gene3D - 230 413 - -
Tsu02g04890 486 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 36 412 IPR016064 -
Tsu02g04890 486 Pfam Diacylglycerol kinase accessory domain 231 405 IPR000756 GO:0004143|GO:0007205
Tsu02g04890 486 PANTHER DIACYLGLYCEROL KINASE 4 486 - -
Tsu02g04890 486 SMART dagk_c4a_7 38 181 IPR001206 GO:0016301
Tsu02g04890 486 MobiDBLite consensus disorder prediction 433 463 - -
Tsu02g04890 486 Gene3D - 37 183 IPR017438 -
Tsu02g04890 486 PANTHER DIACYLGLYCEROL KINASE 4 486 IPR037607 GO:0004143|GO:0007165
Tsu02g04890 486 PIRSF DAG_kinase_plant 2 436 IPR016961 GO:0004143
Tsu02g04890 486 SMART dagk_c4b_2 233 405 IPR000756 GO:0004143|GO:0007205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04890 Tsu-Chr2 57996706 58003137 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04890 6 479 Acyl Lipid Metabolism Gene Families AT2G20900 77.035 0.0 755
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04890 K00901 - gmx:100813809 850.892
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04890 02 57996706 58003137 Tsu02g04890 02 57996706 58003137 ECH
Tsu02g04890 02 57996706 58003137 Tsu06g01141 06 10403640 10409714 PCT