Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04682 ATGGTAGTCATGGAGGAGTTCAAGCACTTTGTGATTGTTAAGTTCAAAGAAGGTGTAGTAGTGGAAGAGCTTACAAAAGGGATGGAGAAATTGGTCTCAGAGATTGATCTTGTCAAATCCTTTGAATGGGGACAAGATGTTGAAAGCCTAGATGTATTGAGACAAGGTTTCACTCATGCTTTCTTGATGACATTCAACAAGAAAGAAGACTATGTTGCATTTCAGAGTCATCCAAATCATGTTGAGTTCTCTGAAAAGTTTTCAACAGCTATTGAAAAAATTGTGCTTTTAGATTTCCCATCCACCCTTGTCAAGCCAGTCAAGGAAGAAGCAGCAGCAGCATAA 345 0.3884 MVVMEEFKHFVIVKFKEGVVVEELTKGMEKLVSEIDLVKSFEWGQDVESLDVLRQGFTHAFLMTFNKKEDYVAFQSHPNHVEFSEKFSTAIEKIVLLDFPSTLVKPVKEEAAAA 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04682 114 PANTHER EXPRESSED PROTEIN 4 107 - -
Tsu02g04682 114 SUPERFAMILY Dimeric alpha+beta barrel 6 101 IPR011008 -
Tsu02g04682 114 Pfam Stress responsive A/B Barrel Domain 8 100 IPR013097 -
Tsu02g04682 114 Gene3D - 3 112 - -
Tsu02g04682 114 ProSiteProfiles Stress-response A/B barrel domain profile. 7 99 IPR013097 -
Tsu02g04682 114 PANTHER - 4 107 IPR044662 -
Tsu02g04682 114 SMART Dabb_2 7 101 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04682 Tsu-Chr2 55877386 55878287 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04682 - - gmx:100500080 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04682 02 55877386 55878287 Tsu02g04682 02 55877386 55878287 ECH
Tsu02g04682 02 55877386 55878287 Tsu02g03738 02 42265514 42267014 PCT