Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04680 ATGTCCGAACCCGATCCCAAAACTCGTCAACGATCAGTCCAATGGTCACCGGCGACAACGTCACCGGAAAGTAAACCAGTTCAACCTTCATGGGCGAAGAAAACCGGTTTTAAGCCGAAATTCTCCGGTGAGACCAATGCCGGTGATTCTGGTCAGATAACGTTGCCGCCTAAGTCGACGAGAGAATTAGAAGTGAGCACGGATCTTGAAGCTGGACGTGTTAGAGGTCCGACGACGACGACGGCGCCAGTTAACGGCGTGTTGAAGATTCCGCAACTTCCGGTTTCGAAAGATTTTGTAGCGAAGAAACGGAGAGACTCTGATGGAGTTCCGAGTACTAATGGTCAGGTGAAGGTTGGAGTTGAACAGCCGGTGAGGAGAACGGCGAGGAGTGAAGAAGTTGGTGGTTCGTTGCCGCAGActgttgatgatgatggtttcGTGGTTAGGCATTCGCATATGAAGTATGAACTAAGAGATTCACCTGGTTTAgTTCCCATTGGTGTGTATGGTATTCAGCATTATGTTTCAATATTAGGTTCATTGATTCTCATACCACTTGTGATTGTTCCTGCTATGGGAGGTTCTCATGAGGAAACTGCTGCAGTGGTATCAACTGCGCTCTTCGTGTCTGGAATGACGACACTCTTGCATACTTTATTTGGGTCTAGGTTACCATTGATACAAGGGCCTTCTTTTGTTTACCTGGCTCCGGTTTTGGCTATCATCAACTCGCCCGAGTTTCAAGGATTAAATAGAAATAAATTCAAACATATAATGAGGGAGCTGCAGGGGGCTATAATTATCGGATCTGCTTTTCAAACTTTACTTGGATATACTGGACTTATGTCACTGTTAGTAAGGTTTATCAATCCCGTGGTTGTATCCCCAACCATTGCTGCAGTTGGACTTTCATTTTATGGTTATGGTTTTCCTATAGTTGGCTCATGTATTGAGATCGGTGCAGTACAGATATTAGTGgttattgttttttctcttTATCTTCGCAAGATATCTGTTCTTGGGCACCGCATATTTCTAATATACGCAGTTCCTTTGGGTTTGGCAATTACATGGGCGGTTGCTTTCTTGCTGACTGAAGCTGGAGCCTATAACTACAAAGGGTGTGACATAAACATACCTGCCTCAAATATAGTTTCAGAGCACTGCAGAAGGCACATTTCAAGGATGAAACAATGTCGAATTGATACTTCCCATGCAATGAAATCATCCCCGTGGTTTAAATTTCCCTATCCACTGCAATGGGGTACTCCTGTCTTCCACTGGAAAATGGCTCTTGTGATGTGCGTGGTTTCCTTAATCTCGTCTGTGGATTCGGTTGGCTCATATCATGCATCTTCATTATTGGTAGCGTCTAGACCTCCAACTCCTGGGGTTCTTAGTCGCGGAATTGGTCTGGAAGGTCTTTCTAGTGTGTTGGCTGGTCTCTGGGGTACTGGAACTGGATCTACAACTTTAACTGAAAATGTTCATACAATTGCTGTGACTAAAATGGGAAGCCGCAGAGCAGTTCAACTGGGTGCATTTATTCTGATAGTGCTATCTCTCGTGGGGAAGGTTGGAGGGTTCATTGCTTCAATTCCTGTAGTCATGGTTGCTGGTCTCCTCTGCTTTATGTGGGCAATGCTTACAGCATTGGGCTTGTCCAATCTACGCTATAGTGAGGCTGGAAGCTCTCGCAATATCATCATAATTGGATTATCGCTGTTCTTCTCTCTTTCCATACCTGCATATTTTCAACAATATGGCATCTCTCCAAATTCCAACTTGTCAGTGCCAAGTTATTTTCAGCCTTACATTGTGGCTTCTCACGGGCCTTTCCAAAGCAAATATGGAGGGTTGAACTATTTTCTGAACACAATATTTTCGCTGCACATGGTGATTGCTTTTCTCGCTGCCGTTATCTTGGATAATACTGTACCTGGCAGTAAGCAAGAACGTGGAGTATATGTTTGGTCGGAACCTGATGTTGCTAGAAGAGATCCTACTATTGCCAAAGACTATGGGTTGCCATCGAGAGTTGGTCGAATTTTTAGATGGGTGAAGTGGGTTGGCTTGTGA 2082 0.4385 MSEPDPKTRQRSVQWSPATTSPESKPVQPSWAKKTGFKPKFSGETNAGDSGQITLPPKSTRELEVSTDLEAGRVRGPTTTTAPVNGVLKIPQLPVSKDFVAKKRRDSDGVPSTNGQVKVGVEQPVRRTARSEEVGGSLPQTVDDDGFVVRHSHMKYELRDSPGLVPIGVYGIQHYVSILGSLILIPLVIVPAMGGSHEETAAVVSTALFVSGMTTLLHTLFGSRLPLIQGPSFVYLAPVLAIINSPEFQGLNRNKFKHIMRELQGAIIIGSAFQTLLGYTGLMSLLVRFINPVVVSPTIAAVGLSFYGYGFPIVGSCIEIGAVQILVVIVFSLYLRKISVLGHRIFLIYAVPLGLAITWAVAFLLTEAGAYNYKGCDINIPASNIVSEHCRRHISRMKQCRIDTSHAMKSSPWFKFPYPLQWGTPVFHWKMALVMCVVSLISSVDSVGSYHASSLLVASRPPTPGVLSRGIGLEGLSSVLAGLWGTGTGSTTLTENVHTIAVTKMGSRRAVQLGAFILIVLSLVGKVGGFIASIPVVMVAGLLCFMWAMLTALGLSNLRYSEAGSSRNIIIIGLSLFFSLSIPAYFQQYGISPNSNLSVPSYFQPYIVASHGPFQSKYGGLNYFLNTIFSLHMVIAFLAAVILDNTVPGSKQERGVYVWSEPDVARRDPTIAKDYGLPSRVGRIFRWVKWVGL 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04680 693 MobiDBLite consensus disorder prediction 45 61 - -
Tsu02g04680 693 Pfam Permease family 169 586 IPR006043 GO:0016020|GO:0022857|GO:0055085
Tsu02g04680 693 MobiDBLite consensus disorder prediction 1 62 - -
Tsu02g04680 693 MobiDBLite consensus disorder prediction 7 28 - -
Tsu02g04680 693 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 29 693 - -
Tsu02g04680 693 PANTHER NUCLEOBASE-ASCORBATE TRANSPORTER-LIKE PROTEIN 29 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04680 Tsu-Chr2 55844182 55854257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04680 23 693 Organic Solute Cotransporters AT2G27810 70.293 0.0 941
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04680 - - aprc:113854911 1142.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04680 02 55844182 55854257 Tsu02g04680 02 55844182 55854257 ECH
Tsu02g04680 02 55844182 55854257 Tsu02g03731 02 42188308 42194900 PCT