Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04566 ATGGTTATGCCAGAAACAAATCCAGCCAATGGATTGGCTGCACTTCCTCAAGATGATAATAGGCTTTCAAGTATAAATtccgcaaatattttagaaaacgTGACAGACAAGAAACTAATCCAGTGGATGTTAACTCTCCATCAAATAGGTCTTGATGTGGTTCGCACTGATAGGACATTGGTTTTTTATGAGAAGCAAGAAAACTTGTCAAAACTATGGGATATTCTTGCGGTTTATGCTTGGATAGATAAAGAAGTTGGGTACGGTCAAGGAATGAGTGACCTATGTTCTCCAATGATAATTCTTCTCGATGATGAAGCAGACGCATTTTGGTGCTTTGAGCGACTGATGCGTAGACTTCGAGGAAATTTCAGATGCATTGGTCGCACTCTTGGGGTGGAGGCTCAACTAAGTAATTTGGCTTCAATTACTCAAGTAGTTGATCCAAAGCTTCATAAACATATAGAACATATTGGTGGAGGGGACTATGTATTTGCTTTTCGGATGCTAATGGTTCTGTTTCGTCGAGAATTTTCCTTTTGTGATTCATTGTACCTATGGGAGATGATGTGGGCTCTAGAATATGATCCTTCGATGTTCTTGATGTATGAAGAAGCTCAATCAGCTTCCGAAAATGCTGAGAGCTTCAAAGGAAAAGCAAAGTCAATACGACAATGTGGAAAATACGAGAGACAAAATATGAGAAATGGAGCAAAGAATGCTGAATCTCCTCTTCCTATATCTGTTTTCCTTGTCGCTAGTGTGTTGAAAGATAAAAGTACAAAACTACTCGATGAAGCGCGAGGCTTGGACGATGTTGTCAAGATATTGAATGACACAACAGGAAATCTAGATGCCAAAAAAGCTTGCATGGAGGCTGTGAAGcttcacaaaaaatatttaagaaagGCCAAGAAAGCCTGA 924 0.381 MVMPETNPANGLAALPQDDNRLSSINSANILENVTDKKLIQWMLTLHQIGLDVVRTDRTLVFYEKQENLSKLWDILAVYAWIDKEVGYGQGMSDLCSPMIILLDDEADAFWCFERLMRRLRGNFRCIGRTLGVEAQLSNLASITQVVDPKLHKHIEHIGGGDYVFAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPSMFLMYEEAQSASENAESFKGKAKSIRQCGKYERQNMRNGAKNAESPLPISVFLVASVLKDKSTKLLDEARGLDDVVKILNDTTGNLDAKKACMEAVKLHKKYLRKAKKA 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04566 307 Pfam Rab-GTPase-TBC domain 35 194 IPR000195 -
Tsu02g04566 307 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 27 307 - -
Tsu02g04566 307 SMART tbc_4 12 217 IPR000195 -
Tsu02g04566 307 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 35 154 IPR035969 -
Tsu02g04566 307 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 25 124 - -
Tsu02g04566 307 ProSiteProfiles TBC/rab GAP domain profile. 32 194 IPR000195 -
Tsu02g04566 307 Gene3D - 131 307 - -
Tsu02g04566 307 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 132 300 IPR035969 -
Tsu02g04566 307 PANTHER RAB-GTPASE-TBC DOMAIN-CONTAINING PROTEIN-RELATED 27 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04566 Tsu-Chr2 54695046 54700675 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04566 - - aprc:113854580 506.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04566 02 54695046 54700675 Tsu02g04566 02 54695046 54700675 ECH