Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04558 atggatTATGAACCTCCTTTTTTCAAGACATACAAGAAAATCTTGGAAAAAAACCATGGAGATTGTTCAGAAAATGATGATCAAGATTTATACTCTATGGTAGAAAGAAGTGATGAATTACCTTTGATTGATCTTGAGAGATTAAATGATGAACATGAGAGAGAAGAATGCATGAAAGAAATAAGTGAAGCAGCTAGTGAATGGGGTTTTTTTCAAGTTATTAATCATGGAATTCCAAAAGAGATTCTAGAGAACATGATATCTGAACAAAAGAAATTGTTCTATCAGCCTTTTGAGGATAAATTATGTGCAGAAGCTGTTTTTAATTTGTCTGAGAAAACTTATAGATGGGGAAATCCATGTGCAAATAATCTAAGACAACTTTCTTGGTCAGAAGCTTTTCATTTTACTCTGTCAGATATACCAAATATGGACCAACAACATATAACTCTCAGGTCAAGCCTTGAAATTTTTGCAACAAGAATGGCCAATCTTGCTGAAAACTTGGCAGAGATTCTTGCACTCAAATTGAATATGAAACCaaaccattttcaagagaatTATTTGCCACCAAGTTCTTTCCTTCGACTCAATAGATATCCTCCATGTCCTATATCTTCAAAGGTGTATGGTCTCTTACCTCATAGTGACACAAGTTTCCTTACAATCCTTAATCAAGATAGTGTTGGGGGCATGCAATTGATGAAAGATGGAAAATGGGTTGATGTCAAGCCTAATCCAAGAGCTCTTGTTGTTAATATTGGTGATTTATTTCAGGCATTGAGCAATGATGTTTACAAAAGCATAAAACACAGAGTGGCTGCTTCTGAAGAGATAGAGAGGTTTTCTACCACATTTTTCTATTGCCCCTACAATGATGCAGTTATACAAAGTGAAAACAAGCCAgctaaatataagaaattcaCTTTGAGGGAATATAGAAAACAAACTCAGAAAGATGTCAAGAACATTGGTGACAAAGTTGGGCTCCCTAGATTTGTTCTTTAG 1008 0.3363 MDYEPPFFKTYKKILEKNHGDCSENDDQDLYSMVERSDELPLIDLERLNDEHEREECMKEISEAASEWGFFQVINHGIPKEILENMISEQKKLFYQPFEDKLCAEAVFNLSEKTYRWGNPCANNLRQLSWSEAFHFTLSDIPNMDQQHITLRSSLEIFATRMANLAENLAEILALKLNMKPNHFQENYLPPSSFLRLNRYPPCPISSKVYGLLPHSDTSFLTILNQDSVGGMQLMKDGKWVDVKPNPRALVVNIGDLFQALSNDVYKSIKHRVAASEEIERFSTTFFYCPYNDAVIQSENKPAKYKKFTLREYRKQTQKDVKNIGDKVGLPRFVL 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04558 335 Pfam 2OG-Fe(II) oxygenase superfamily 194 290 IPR044861 -
Tsu02g04558 335 SUPERFAMILY Clavaminate synthase-like 33 320 - -
Tsu02g04558 335 Coils Coil 45 65 - -
Tsu02g04558 335 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 190 290 IPR005123 -
Tsu02g04558 335 Pfam non-haem dioxygenase in morphine synthesis N-terminal 40 139 IPR026992 -
Tsu02g04558 335 Gene3D - 37 328 IPR027443 -
Tsu02g04558 335 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 15 327 - -
Tsu02g04558 335 PANTHER GIBBERELLIN 2-BETA-DIOXYGENASE 15 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04558 Tsu-Chr2 54649445 54656928 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04558 39 313 Glycosyltransferase AT5G59530 33.219 2.09e-44 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04558 - K04125 lja:Lj0g3v0081939.2 461.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04558 02 54649445 54656928 Tsu02g04558 02 54649445 54656928 ECH