Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04556 ATGGCGGCGAAACCCAACGATTGTTGTTCATGTTGTTCAGGTTTTATAATAACCATGGGATTAACATCCTTATTCATATGGTTAAGTCTAAAAGTAGACGAACCACATCTCTTCATAGATCAAATTTACATTCCTACCCTCAACAAAACTCTTAATTCCAAATCAAACACTTCTTTAATCTTCACTTTAAAACtcgtcaatccaaacaaagaTAAAGGACTTCAATACGACGCCGTTCATCTTAATTTCAGTGTTTTCACCAATGAAAATTTGATACGTGCAATTGGTAATGGTACTGTTGAGAGATTTTATCAAGGTCATGAGAAAAAGGCGAAGAAGATTGTAACGGTTAACGGAGCTGGGAATTTAACGGAGAGAGTTAACGGGAAGGTTTATTTGAGAGTTGATTATGTAACGGCGGTTAAGTATAAGATTTTGGTTTGGTATAGTAAAAGGGATCATTTGTGGGGAGGGGCAAATGTGGAAATTGGTGATTTGGGTTTGAAAGTTGGGAAGAAAGGTGTTAGGCTTGGTGGGAATGTACCAGTGAAGATTGTTTCCGGTGGAGTTAAACCGCGTGGAGGCTATCGTGCGCTTATggtgttttttgttgtttttgttgctcTTGTTGGGTTTACTTGA 642 0.3567 MAAKPNDCCSCCSGFIITMGLTSLFIWLSLKVDEPHLFIDQIYIPTLNKTLNSKSNTSLIFTLKLVNPNKDKGLQYDAVHLNFSVFTNENLIRAIGNGTVERFYQGHEKKAKKIVTVNGAGNLTERVNGKVYLRVDYVTAVKYKILVWYSKRDHLWGGANVEIGDLGLKVGKKGVRLGGNVPVKIVSGGVKPRGGYRALMVFFVVFVALVGFT 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04556 213 PANTHER OS05G0367900 PROTEIN 6 198 IPR044839 GO:0098542
Tsu02g04556 213 PANTHER NDR1-LIKE PROTEIN 6 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04556 Tsu-Chr2 54543307 54544644 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04556 - - vun:114183543 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04556 02 54543307 54544644 Tsu02g04556 02 54543307 54544644 ECH
Tsu02g04556 02 54543307 54544644 Tsu02g03048 02 33697162 33697821 PCT