Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04555 atgcgGTACTTCTTCATTATTAGAAATCTATGCACTGGCTTACGTTCACATTCATCCACCAAATTCAACcctcattcttcttctttttcatcatcatcttcttcctcttcaactCATTCCAAATTCGATGTTGATTCTATCCTCTCAAGTCTCAACCTTCTACGAAACTCTGATTCAGATGAATTGTCTAGTGCGGTTTTTCAGCAGGTTTCGTCTATTTTCTACGGTGGTAAGTCAGTCAAGAGATCTGATTCCGAGGAAATTGATGATGCAAATGAGTATGAAAAAATACTGAATATATTGCAGTTGCCAAACATACCTCAAAGCAATATATCACTGCGAAGGAAACAGGCTGCTCgcgaaaagaaaagaaaatgcaCGTTCAAAATTACTCAAGAACATCGTTTCCGCCACTTGATTGAAAGCAGTGGAAAGATACTAGGACCTGAGGCTACCCTTGAGTTGTTTGATAAAGTGGGACGAAAACCAGGCGTGAAAGGATACAATGCATTGGTAGAAATATGCATAGCTAAAGCCAGGGTAGCTGAGAATGAAGACATTGCAATTGAAGAGATGGGGAAGGTTTTTCACCTTTATGAATCAATGAGGAAACAAGGTTTAGAGCTCGAAGAGCAGACATATCGCCCACTTCTTATGTATACAATTGACATGTGTATGGTTGAAGAGTTTCAGTTTTTCTGTCATGTTATCAAAGAAGAGATTCCCAGTTCAACTGCAAGACTTGGTTACTATGAAATGATGTTGTGGTTAAAAGTTAAAGACGAAGAAAAGATTCAGGGTCTTTGTAATTATATTGCAGAGAATGACGGCAAGGACACTTTAGATTTACGAGAAAACTATTTATTGGCTCTTTGTGAGAGTGCACGGAAGGAGAATATTTTGGAGGTGCTGGAAATCATGGACATAAAAAAGCTTTCATCTGTTGATTCTGTAGCGAAGATATTTCAGACCTTGGGAAGACTACTATTGGAACCTGTTGCAGAGAAGCTCCTTTTGGACTTCAGAACAAGTGATCATGAAGAAGATAATATTACAAACTTCATTTCTAGTTATGTAGTCAGCATTCCAGATTTATCGGTTGAGgaaagcataaaaaaattcaaggatTTTCACGAAAAACTAGAAGTTTTACCTTCCTCCTCATCACATGAGAAGCTCATTTTACACAGCTGTGCATTGCTCAAGGAGCACACTTGTTCCGATGGGGAGTTGGATCAATTGCTTCTGCTACTCGAGGAACTAAATGATACATCATATTGGAATGATACTTGCTGCAGAATCATCTTGTGTTGTATTTGGAATAAGCGTTTAagTTCTGCTATTGACTTGTGTAAGCTCCTGAAGGATAAGTTGCAAATTGATGCACTGGTTATGAAAGTTCTCTTTGATAAGGTATTTTCTCAAATTGAAGAGTCAGAGTCCAATCATTTGCAAACTTGCATGGAGTTGCTTTCAGAAATGAAGGATAAGCTTGGCCTTTTCCCTTCACAAAAATGTTATGATTCTCTGCTAGCTGCTGCATGTGCAGACACCAATGATAATTCACAAAATGCTGAATGA 1581 0.3612 MRYFFIIRNLCTGLRSHSSTKFNPHSSSFSSSSSSSSTHSKFDVDSILSSLNLLRNSDSDELSSAVFQQVSSIFYGGKSVKRSDSEEIDDANEYEKILNILQLPNIPQSNISLRRKQAAREKKRKCTFKITQEHRFRHLIESSGKILGPEATLELFDKVGRKPGVKGYNALVEICIAKARVAENEDIAIEEMGKVFHLYESMRKQGLELEEQTYRPLLMYTIDMCMVEEFQFFCHVIKEEIPSSTARLGYYEMMLWLKVKDEEKIQGLCNYIAENDGKDTLDLRENYLLALCESARKENILEVLEIMDIKKLSSVDSVAKIFQTLGRLLLEPVAEKLLLDFRTSDHEEDNITNFISSYVVSIPDLSVEESIKKFKDFHEKLEVLPSSSSHEKLILHSCALLKEHTCSDGELDQLLLLLEELNDTSYWNDTCCRIILCCIWNKRLSSAIDLCKLLKDKLQIDALVMKVLFDKVFSQIEESESNHLQTCMELLSEMKDKLGLFPSQKCYDSLLAAACADTNDNSQNAE 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04555 526 Gene3D Tetratricopeptide repeat domain 359 524 IPR011990 GO:0005515
Tsu02g04555 526 PANTHER OS02G0132600 PROTEIN 68 402 - -
Tsu02g04555 526 PANTHER OS02G0132600 PROTEIN 401 523 - -
Tsu02g04555 526 PANTHER OS02G0132600 PROTEIN 68 402 - -
Tsu02g04555 526 PANTHER OS02G0132600 PROTEIN 401 523 - -
Tsu02g04555 526 MobiDBLite consensus disorder prediction 19 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04555 Tsu-Chr2 54535118 54540800 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04555 - - mtr:MTR_2g082940 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04555 02 54535118 54540800 Tsu02g04555 02 54535118 54540800 ECH