Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04549 ATGGAACAAAGGACTAGGTTGGCTAAAATCCAAGAATATCTATATCGTCATGTAGCGTCGAGCAGTATACCGAAACAACTTCATTGCCTTGACTTGAGGTTGGCACATGAGCATACGAATAATGCAGCAGCACGTCTTCAGCTACCGTCTGCAGAACTAGTTCCTGCTCTTGTCGACAATTCCTATTACCATTTTGTCGTAGCCTCAGATAATGTGCTAGCTGCCTCGGTGGTTGCAACGTCACTCGTTCGCAACTGTTTACGACCTAGGAATGTTGTTATACATATCATTACAGACCGAAAGACTTATTATCCAATGCAGGCTTGGTTCTCATTGCATCCTTTAGCGCCTGCTGTGATTGAGGTCAAACCATTGCACCATTTTGATTGGTTTTCGAAGGGGAAGGTACCTGTTTTAGAAGCAATGGAGAAAGATCAGAAGGTTCGGTCGCAGTTTAGAGGAGGTTCATCAGCTATAGTTGCAAATACATCTGAGAAGCCAAATGTTATTGCATCAAAACTACAAGCACTTAGTCCCAAATATAATTCAGTGATGAACCACATTCGGATACATCTACCAGAGTTGTTTCCAAGTCTTAATAAGTTGGTCTTCCTCGACGATGATATTGTGGTACAAACCGATCTTACACCTCTGTGGGACATTGACATGAATGGAAAGGTAAATGGAGCAGTGGAAACATGTCATGGAGAAGACAAGTTTGTAATGTCAAAGAGGTTGAAAAGCTATTTGAACTTTTCTCACCCTCTAATAtcaaaaaatttcaatccaaaTGAATGTGCTTGGGCCTATGGCATGAACATTTTTGATTTGGAGGCTTGGAGGAAGACCAATATAAGCAATACATATCATCATTGGGTTGGGCAGAACATTAAATCAGACCTAAGTTTGTGGCAGCTAGGGACATTACCTCCTGGATTGATAGCGTTTCATGGTCATGTCCACATTATAGATCCTTTCTGGCATATGCTGGGATTAGGATATCAGGAAAATACAAATTTTGCTGATGTTGAGAATGCTGGTGTCATCCATTTCAATGGAAGGGCAAAGCCATGGCTAGACATAGCTTTTCCACAACTAAGGTCATTGTGGACAAAATATGTTGATTTCTCAGATAAGTTCATCAAAAGCTGTCACATTAGAGCATGA 1167 0.4053 MEQRTRLAKIQEYLYRHVASSSIPKQLHCLDLRLAHEHTNNAAARLQLPSAELVPALVDNSYYHFVVASDNVLAASVVATSLVRNCLRPRNVVIHIITDRKTYYPMQAWFSLHPLAPAVIEVKPLHHFDWFSKGKVPVLEAMEKDQKVRSQFRGGSSAIVANTSEKPNVIASKLQALSPKYNSVMNHIRIHLPELFPSLNKLVFLDDDIVVQTDLTPLWDIDMNGKVNGAVETCHGEDKFVMSKRLKSYLNFSHPLISKNFNPNECAWAYGMNIFDLEAWRKTNISNTYHHWVGQNIKSDLSLWQLGTLPPGLIAFHGHVHIIDPFWHMLGLGYQENTNFADVENAGVIHFNGRAKPWLDIAFPQLRSLWTKYVDFSDKFIKSCHIRA 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04549 388 SUPERFAMILY Nucleotide-diphospho-sugar transferases 63 386 IPR029044 -
Tsu02g04549 388 CDD GT8_like_1 63 375 - -
Tsu02g04549 388 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 1 386 IPR029993 GO:0047262
Tsu02g04549 388 PANTHER GALACTURONOSYLTRANSFERASE 12-RELATED 1 386 - -
Tsu02g04549 388 Pfam Glycosyl transferase family 8 62 362 IPR002495 GO:0016757
Tsu02g04549 388 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 65 383 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04549 Tsu-Chr2 54477750 54481074 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04549 1 388 Glycosyltransferase AT5G54690 82.732 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04549 K20867 - gmx:100802623 733.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04549 02 54477750 54481074 Tsu02g04549 02 54477750 54481074 ECH
Tsu02g04549 02 54477750 54481074 Tsu02g03061 02 33930242 33932830 PCT