Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04546 atgGAAGGCCAAGAACATCTCAAAAAGTCCAAGGTTATCAAAATAGACTCAAAAAAATCATGGGATCATTACATTTCTTATGCTACCAATCAAAATTACCTTGTTGTGGTTCATTTCTCTGCTTTTTGGTGTGTGCCATCTATACTTatgaattctttttttaaagaattgGCCTCCAACTATGAAGATGTTCTTTTTCTAACATTGGATGTGGATGAGGTTGAGGAAATTGCCTCCAAGATGGAAATTAAAGCCATACCTACCTTTCTATTGTTGAGTGGAGGAACTCTTGTGGACAAAATTGTGGGTGCAAATTCTGATGAAATAAGGAAAAGGGTTGATCATTTTATTCAATCAACTCCTTCATAA 369 0.336 MEGQEHLKKSKVIKIDSKKSWDHYISYATNQNYLVVVHFSAFWCVPSILMNSFFKELASNYEDVLFLTLDVDEVEEIASKMEIKAIPTFLLLSGGTLVDKIVGANSDEIRKRVDHFIQSTPS 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04546 122 CDD TRX_family 34 114 - -
Tsu02g04546 122 PANTHER THIOREDOXIN 1 121 - -
Tsu02g04546 122 Gene3D Glutaredoxin 1 121 - -
Tsu02g04546 122 SUPERFAMILY Thioredoxin-like 8 118 IPR036249 -
Tsu02g04546 122 ProSiteProfiles Thioredoxin domain profile. 1 118 IPR013766 -
Tsu02g04546 122 PANTHER THIOREDOXIN 1 121 - -
Tsu02g04546 122 Pfam Thioredoxin 16 113 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04546 Tsu-Chr2 54460926 54462756 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04546 K03671 - gmx:100499858 197.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04546 02 54460926 54462756 Tsu02g04546 02 54460926 54462756 ECH
Tsu02g04546 02 54460926 54462756 Tsu02g03063 02 33939461 33941617 PCT