Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04545 ATGGCTCCTCTAACAAACTTGCATGGAGTATCCAAAACTTTAACTCCAATTACATGTCTTCTTCCAAATGCACAAAGAACAACCTTTAGGAAAGGACAAGTAGTTGTTGGATTTCTtggaaacaaaacaaagaaattatCAGAATGTGAATCAGTTGTTAACACTACAAGAAGAACAGCTGCAATAAGTCTTGTTTCTTTAGTACTTACATGGCAATTCAATGAGAAGATTTCACTTGCTAAGGATAATGGATTTTGGATTGATGGACCTATTCAAGAACCAATTGTCACTAATAATATTGTGAATGAGAAAACGGGGACACGTTCTTTTATTAAGAAGAGACTCTACATGGCAAATATTGGTGCAAAAGGAAGTGTTTTTAGGATCAAGAAATCTTCATTTGATCTTCTTGCAATGGCTGATTTAATTGCACAAGACACACTCAACTATGTTAGGAGGTACCTAAGACTCAAGTCAACTTTCATCTACTATGATTTTGACAAGGTTATCTCTGCTGTTCCAGTTGAAGATAAGCAAGAATTAACTGATGTGGCTAACaaattatttgataattttgaaaggCTTGAAGAAGCTTCAAGGAACAAAAATCTAGCTGAAACACAAGCATGCTATAAGGAAACTGAAGTTATGCTTAAAGATGTTATGGACAGGATGACTATAATGTATAAAACAATTTGA 699 0.3276 MAPLTNLHGVSKTLTPITCLLPNAQRTTFRKGQVVVGFLGNKTKKLSECESVVNTTRRTAAISLVSLVLTWQFNEKISLAKDNGFWIDGPIQEPIVTNNIVNEKTGTRSFIKKRLYMANIGAKGSVFRIKKSSFDLLAMADLIAQDTLNYVRRYLRLKSTFIYYDFDKVISAVPVEDKQELTDVANKLFDNFERLEEASRNKNLAETQACYKETEVMLKDVMDRMTIMYKTI 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04545 232 Gene3D - 89 226 IPR023222 -
Tsu02g04545 232 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 3, CHLOROPLASTIC 1 225 - -
Tsu02g04545 232 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 51 225 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Tsu02g04545 232 Coils Coil 178 198 - -
Tsu02g04545 232 SUPERFAMILY Oxygen-evolving enhancer protein 3, 116 225 IPR023222 -
Tsu02g04545 232 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 1 225 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04545 K08901 - gmx:100814163 338.576
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04545 02 54456551 54458250 Tsu02g04545 02 54456551 54458250 ECH