Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04531 ATGGTAGCTATGGCTATGGTTGCTCTTCAAAGTTCCATGACCTCCCTTTCCCTTTCCTCTAAATCTTTCTTCGGTCAGCCTATCACACTCCCTCCTCTTCTTCCGGGTAAGCGAACAGAGAAGAAATGTCTTACTGTAATGAAGTATAAACGATGGGAGCGAATTGAATGTAAACCAAACAGTCTTCCTAAGTTACACAAAATGCATGTTAAAGTTGGAGATACAGTGAAAGTCATATCTGGACGTGACAAGGGTCAAGTTGGAGAGATTACTAAGATCTTCAAGCACAACAGCACTGTTGTTGTCCAGGACATAAACTTGAAAACAAAGCATGCCAAGAGTAGAGAAGAGGGAGAACTAGGGCAAATAATGCAGATTGAAGCTCCTATCCACAGTTCAAATGTGATGCTCTACTCGAAAGAAAATAATGTAGAGAGCCGTGTAGGTCATAAAGTCATTGAGAATGGTAAAAAAGTTCGGTACCTACTGAAAACTGGAGAGATAATTGATAGTGATGAGAATTGGAAGAAACTGAAGGAAGGTTCTAAGACTACTGAAGTTGCTGCTGCTTAG 573 0.4066 MVAMAMVALQSSMTSLSLSSKSFFGQPITLPPLLPGKRTEKKCLTVMKYKRWERIECKPNSLPKLHKMHVKVGDTVKVISGRDKGQVGEITKIFKHNSTVVVQDINLKTKHAKSREEGELGQIMQIEAPIHSSNVMLYSKENNVESRVGHKVIENGKKVRYLLKTGEIIDSDENWKKLKEGSKTTEVAAA 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04531 190 Pfam KOW motif 72 102 IPR005824 -
Tsu02g04531 190 CDD KOW_RPL26 73 137 IPR041988 GO:0003723
Tsu02g04531 190 ProSitePatterns Ribosomal protein L24 signature. 73 90 IPR005825 GO:0003735|GO:0005840|GO:0006412
Tsu02g04531 190 TIGRFAM rplX_bact: ribosomal protein uL24 67 169 IPR003256 GO:0003735|GO:0005840|GO:0006412
Tsu02g04531 190 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L24 4 186 IPR003256 GO:0003735|GO:0005840|GO:0006412
Tsu02g04531 190 PANTHER 50S RIBOSOMAL PROTEIN L24, CHLOROPLASTIC 4 186 - -
Tsu02g04531 190 Gene3D - 61 168 IPR014722 -
Tsu02g04531 190 SMART kow_9 69 96 IPR005824 -
Tsu02g04531 190 Hamap 50S ribosomal protein L24 [rplX]. 68 164 IPR003256 GO:0003735|GO:0005840|GO:0006412
Tsu02g04531 190 SUPERFAMILY Translation proteins SH3-like domain 64 168 IPR008991 -
Tsu02g04531 190 Pfam Ribosomal proteins 50S L24/mitochondrial 39S L24 105 169 IPR003256 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04531 K02895 - gmx:100500009 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04531 02 54356439 54359657 Tsu02g04531 02 54356439 54359657 ECH