Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04523 ATGGCGGCTACATTCATCACCCTTTCCGATGATCTCAACTCGCCAATCTTATCTCCACCGTCGAAAAACATGAAGGAAACGGAAAAGATATGCATAGATGATATGCTCGAGAAATACTGCGGCGAATTTGGAAAGTGGCAGTTGAAACATTTTATCCTTACATGTCTTGCATGGGCACTAGAAGCTTTTCATACTATGGTTATGATATTTGCTGATCGGGAACCTGATTGGAGGTGTGTTAATGGTGTGGAATGCGGCGGTCGGAGTGTGTGTGGGATGAAGGCGGCGGAGTGGGAGTGGATCGGAGGGAAAGCGGCATCTACGGTTTCTGAATGGAGTTTGATTTGTGGTGATAAGTTTAAAGTTGGACTTGTTCAGGCTGTTTTCTTCGCTGGGTGCATGATTGGGGCAGGAGTTTTTGGTCATCTTTCAGACTCATTTTTAGGAAGAAAAGGTTCTCTCACAGTAGTTTGTGTCTTAAACACCATATTTGGTTGCTTAACAGCATTCTCCCAAAACTATTGGACCTACGTCTTACTTCGCCTCCTCACTGGTTTCAGCAGCGGCGGTGTTGGCCTTTGTGCCTTTGTCCTTGCCACTGAACCCATTGGCCCATCAAAACGAGGAACGGCAGGAATGTGCACTTTCTACTTCTTCTCTGGCGGTATTGTAATTCTCTCAGGTATCGCCTACATCTTCCAAACATGGCGCACACTCTACATCGTAAGCTCTATCCCCTCCTTTCTGTACATAATGCTCGTCCTTCCCTTCATTTATGAGTCCCCAAGATGGTACCTTGTTCGAGGAAGAATACACGAAGCGACAAAAATCATGTCCACCATTGCTTCTTCCAATGGAAAACACCTTCCAGATGGAGTATTCCTTGCATTAGATGAAGAagtatcaaaatcaaaaatagCAACAAATGATGATGAATACAACCTAATTAGTTGCATAGATAACAAGGATGCACAAATTGGATCAATTGTCGATGTGATTTGCTATCCAGTTACACGTATTAGGTTATTTCTAGCGGTAGCTATTAACTTCTTAACCTCAATGGTTTATTATGGTCTTAGCTTAAACGTTGTCAACCTAGAAACCAACCTCTACATGAACGTGCTTTTGAATGCAGTTGCAGAAATGCCAGCATTCTTTATAACCGCAATGTTATTGGATAAGTTTGGGCGGAAACCATTGACAATCGGGACAATGTGGTTTAGTGGATTATTTTGTCTGATGGGAAGTTTCATGAGTAATATTGGGATGTGGAAAGTAATTAAAATGGTGTGTGGTGTTTTAGGAATATTTGGAATGGCAGGAACTTATAATTTGTTGTATATTTATACGGCAGAGTTATTTCCTACTGTGGTGAGGAATGTGGCATTAGGGTGTACGATTCAGGCGGCACGATTGGGTGGGATATTGGCACCATTTGTAGTCGTTTTGGGTGGTTGGTTGCCATTTGGAGTGTTTGCAGCATGCGGAATTATAGGTGGGATGTTTCCATTTTATCTACCAGAGACACTAAATATGCCTCTTTATGATACATTTAATGGGCTGGAGGCTGGACTTGCATGA 1581 0.4219 MAATFITLSDDLNSPILSPPSKNMKETEKICIDDMLEKYCGEFGKWQLKHFILTCLAWALEAFHTMVMIFADREPDWRCVNGVECGGRSVCGMKAAEWEWIGGKAASTVSEWSLICGDKFKVGLVQAVFFAGCMIGAGVFGHLSDSFLGRKGSLTVVCVLNTIFGCLTAFSQNYWTYVLLRLLTGFSSGGVGLCAFVLATEPIGPSKRGTAGMCTFYFFSGGIVILSGIAYIFQTWRTLYIVSSIPSFLYIMLVLPFIYESPRWYLVRGRIHEATKIMSTIASSNGKHLPDGVFLALDEEVSKSKIATNDDEYNLISCIDNKDAQIGSIVDVICYPVTRIRLFLAVAINFLTSMVYYGLSLNVVNLETNLYMNVLLNAVAEMPAFFITAMLLDKFGRKPLTIGTMWFSGLFCLMGSFMSNIGMWKVIKMVCGVLGIFGMAGTYNLLYIYTAELFPTVVRNVALGCTIQAARLGGILAPFVVVLGGWLPFGVFAACGIIGGMFPFYLPETLNMPLYDTFNGLEAGLA 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04523 526 Pfam Sugar (and other) transporter 118 515 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tsu02g04523 526 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 32 524 - -
Tsu02g04523 526 SUPERFAMILY MFS general substrate transporter 118 514 IPR036259 -
Tsu02g04523 526 ProSiteProfiles Major facilitator superfamily (MFS) profile. 50 511 IPR020846 GO:0022857
Tsu02g04523 526 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 32 524 - -
Tsu02g04523 526 ProSitePatterns Sugar transport proteins signature 1. 388 404 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tsu02g04523 526 Gene3D MFS general substrate transporter like domains 50 518 IPR036259 -
Tsu02g04523 526 ProSitePatterns Sugar transport proteins signature 2. 183 208 IPR005829 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04523 Tsu-Chr2 54288820 54293125 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04523 10 522 Organic Solute Cotransporters AT3G20660 66.860 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04523 K08202 - gmx:100797665 825.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04523 02 54288820 54293125 Tsu02g03072 02 34075739 34079976 PCT