Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04522 ATGGCGGCCACCACATTCTCCTCACTTTCCGACGATCTCAACTCACCGATCTTACCGCCGCCGTTAAAAACCTCAACAGAATCAGAAAAGATCTGCATCGATCAGATGCTTGAGAAATACTGCGGTGAATTCGGAAAGTGGCAATTGAAACATTTCATTCTTACTAGTCTTGCTTGGGCGCTTGAAGCTTTTCATActatggttatgatttttgcTGATCGGGAACCTGATTGGAGTTGTGTTAATGGTGTTGATTGCGGCGGTGGCGGCGGAAGTGTGTGTGGAATGAAGGCGGCGGATTGGAAGTGGATCGGAGGAAAAGCGGCGTCGACAGTTTCTGAATGGAGTTTGATTTGTGGTGATAAGTTTAAAGTTGGACTTGTTCAAGCTCTTTTCTTTGCTGGCTGTATGATTGGAGCTGGAGTGTTTGGTCACCTTTCAGACTCATCTCTTGGAAGAAAAGGTTCACTCACGGTAGTTTGTGCCTTAAATGCCATATTTGGTTGCTTGACAGCATTCTCTCCCAACTATTGGACCTATGTCTTCCTCCGTGTACTCACTGGTTTCAGCACCGGTGGTGTTGGCCTTTGCGCCTTTGTCCTTGCCACTGAACCCATCGGCCCATCAAAACGTGGTATGGCAGGAATGTCCACGTTCTACTTCTTCTCTTGTGGTATTGCAATTCTCTCAGGCATCGCCTACATTTTTCAAACATGGCGCACACTCTACATTGTATCCTCCATTCCCTCCCTCATGTACATAATCCTCATTCTTCCCTTCGTCTCTGAGTCCCCAAGATGGTACCTCGTCCGAGGAAGAATACACGAAGCGACTAAGCTCATGTCCACCATTGCTTCTTCCAATGGAAAACACCTTCCAGATGGAGTTTTCCTTGCATTAGATGAAGAagtatcaaaatcaaaaatagAAACAGATGATGATGAATACAACCTAATTAGTTCCATCGAAAACAAGGATGCACAAATTGGATCCATTGTGGATGTGATTCACTACCCAGTTACACGTATTAGGTTATTTCTAGCGGTAGTAATTAACTTCTCAGCCTCAGTGGTGTATTATGGTCTTAGCTTAAACGTTACCAACCTCGAAACCAACCTCTACATGAATGTGCTTTTAAATGCAGTTGCAGAAATGCCAGCATTCACGATAACAGCAGTGTTATTGGATAAGTTTGGGAGGAAACCATTGACAATAGGAACAATGTGGTTTAGTGGATTCTTTTGTTTGATGGGGAGTTTAATGAGTAATATTGGAGTgtggaaaataattaaaatggtGTGTGGTGTTTTAGGGATATTTGGAATGGCGGGAACTTATAACTTGTTGTTTATTTACACGGCGGAGTTATTTCCTACAGTGGTGAGGAATGCGGCATTAGGGACCGCAACTCAGGCGGCACAAATGGGGGCGATATTGGCCCCTTTTGTAGTAGTTTTGGGTGGGTGGTTGCCGTTTGGAGTGTTTGCGGCATGTGGAATTTTAGGTGGGATGTTTGCGTTTTACCTACCGGAAACACTAAATATGCCTCTTTATGATACATTCAATGGATTGGAGGCTGGACTCGCATGA 1590 0.4308 MAATTFSSLSDDLNSPILPPPLKTSTESEKICIDQMLEKYCGEFGKWQLKHFILTSLAWALEAFHTMVMIFADREPDWSCVNGVDCGGGGGSVCGMKAADWKWIGGKAASTVSEWSLICGDKFKVGLVQALFFAGCMIGAGVFGHLSDSSLGRKGSLTVVCALNAIFGCLTAFSPNYWTYVFLRVLTGFSTGGVGLCAFVLATEPIGPSKRGMAGMSTFYFFSCGIAILSGIAYIFQTWRTLYIVSSIPSLMYIILILPFVSESPRWYLVRGRIHEATKLMSTIASSNGKHLPDGVFLALDEEVSKSKIETDDDEYNLISSIENKDAQIGSIVDVIHYPVTRIRLFLAVVINFSASVVYYGLSLNVTNLETNLYMNVLLNAVAEMPAFTITAVLLDKFGRKPLTIGTMWFSGFFCLMGSLMSNIGVWKIIKMVCGVLGIFGMAGTYNLLFIYTAELFPTVVRNAALGTATQAAQMGAILAPFVVVLGGWLPFGVFAACGILGGMFAFYLPETLNMPLYDTFNGLEAGLA 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04522 529 ProSitePatterns Sugar transport proteins signature 2. 186 211 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tsu02g04522 529 PANTHER ORGANIC CATION/CARNITINE TRANSPORTER 4 33 527 - -
Tsu02g04522 529 Gene3D MFS general substrate transporter like domains 53 521 IPR036259 -
Tsu02g04522 529 Pfam Sugar (and other) transporter 121 518 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tsu02g04522 529 ProSitePatterns Sugar transport proteins signature 1. 391 407 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tsu02g04522 529 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 33 527 - -
Tsu02g04522 529 SUPERFAMILY MFS general substrate transporter 121 517 IPR036259 -
Tsu02g04522 529 ProSiteProfiles Major facilitator superfamily (MFS) profile. 51 514 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04522 Tsu-Chr2 54265865 54271550 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04522 11 525 Organic Solute Cotransporters AT3G20660 69.052 0.0 710
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04522 K08202 - gmx:100818415 822.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04522 02 54265865 54271550 Tsu02g04522 02 54265865 54271550 ECH