Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04496 ATGATAACCAACCTCTTCCTAAACCCTCAACTTCATCCTCTTCCCTTCCCCTcaaaattcatcttcttcactcaCACTTTCAACAAATCTTCAACAATTCTTCCACTTTTCCCCATCACATTCTCAACCACCGCTTCATTCTCCTACGGACCTTCCCTCCAAAAATCCACAATTCCTCATCACCAAAACGACGACGTTCTCAATGAACAAAACTTCACCAGAATCTTCCATCTCGCCGCACTCCGTGTCCCTTCCGCCAAATGCTCTTCCCTCGAAAATCGTCTCCGTGGTCATCTCCTTAATTGGCCTCGTATTCGTAACATTGCTCGTGTTCCCGGTGATGAAATTGATCCTAACATTGTGACTTTATTAGGTCAACAAATTCAATCGAAGGAAAATAATGACGGTGATGTTTTGAGTAGTAATTCTGTTTTGTATCGTGATAAGCTTGCTAAAACGTTTAATACTCGTGGTTATGTTAATTTTCGGAATCTCGAGAAGATTTCAAGGCCGAAAAGgaataagaagaagaatgagaagGAAGGGGAATTTGTTGAAGATGAAGGGAGTAAGCGTGTTGGGAAGAATGGTTATGTTGAGGTTGAGGTTGTTGAAGAAGAAGGTAGTATTGATGAGGGTTTGAGGAATTTGATTGGTGAAGAGTTTGTGCATAGTAAGTGGAAGGGTTCGACTAGGTTGTTGCTTCTTGATGAACGGTATAAGGATTTTGGTGTGGAGGAGTTGCCTGAGGCAATTAAGGCTGTCTTGAAGGAGTATGCAGAAAAAAGCACCACTTTGACTTTTGAACTAGTTAGATGCAAGTTGACACTGTTCTATGATTACTGGCAGACGAATGAGATCTTGGAGGCCATGCTGCCTGAGGGTATGATTGTTCCTACAGCTTTCGAAACTGTTGGTCATATTGCGCACCTGAACTTGAAAGAGGAACATTTACCATACAAGAAGCTTATAGCAAAGGTTGTGCTGGATAAAAATAAGCCAAAGATACGAACAGTTGCGAACAAGATTGACTCCATTCATAATGAGTACCGGACCATGCAACTTGAGGTTTTAGCAGGAAACCACTCTCTTGTGACTACATTAGCTGAGAACGGACTTCGCTTTCATGTTGACTTAGCAAAAGTATATTGGAACACTAGGCTTGGAACTGAAAGACAAAGGCTTCTGAGTGGTTTTACACGGAATGATGTTGTCTGTGATGTTTTCTCTGGAGTTGGTCCTCTTGCCATATCTGCAGCCAAGATAGTTAAGCGTGTTTTTGCTAATGACTTGAACCCATATGCAGTTGAGTATCTAGAAAGAAATAGTGTTCTAAACAAACTCGAGAGGAAGATCAAGGTCTTTAACATGGATGGAAGAAGGTTTATTAAGGCTATGTTTGCCAGTGATAAAGCTCACTCCATCACACAAGTGGTTATGAATTTGCCAAATGATGCTGCAGAATTTCTAGATGCATTTCGGGGAATATACAAAGATAGACCCAAGGAGGGGGAATTGACGTTTCCAATGATCCATGTTTATGGATTCTCCAAAGCAGAGGATCCAGAATTTGATTTTCACGAGAGAATTAGAATTGCATtacttgaagtggcagtcaacGTAGACATGCGACGGGTACGACTTGTTGCACCTGGAAAATGGATGTTGTGCGCATCATTTATTCTCCCTAAAAGCGTAGCATTTGCTAATACCGCAGTTGATGCCTAA 1728 0.4005 MITNLFLNPQLHPLPFPSKFIFFTHTFNKSSTILPLFPITFSTTASFSYGPSLQKSTIPHHQNDDVLNEQNFTRIFHLAALRVPSAKCSSLENRLRGHLLNWPRIRNIARVPGDEIDPNIVTLLGQQIQSKENNDGDVLSSNSVLYRDKLAKTFNTRGYVNFRNLEKISRPKRNKKKNEKEGEFVEDEGSKRVGKNGYVEVEVVEEEGSIDEGLRNLIGEEFVHSKWKGSTRLLLLDERYKDFGVEELPEAIKAVLKEYAEKSTTLTFELVRCKLTLFYDYWQTNEILEAMLPEGMIVPTAFETVGHIAHLNLKEEHLPYKKLIAKVVLDKNKPKIRTVANKIDSIHNEYRTMQLEVLAGNHSLVTTLAENGLRFHVDLAKVYWNTRLGTERQRLLSGFTRNDVVCDVFSGVGPLAISAAKIVKRVFANDLNPYAVEYLERNSVLNKLERKIKVFNMDGRRFIKAMFASDKAHSITQVVMNLPNDAAEFLDAFRGIYKDRPKEGELTFPMIHVYGFSKAEDPEFDFHERIRIALLEVAVNVDMRRVRLVAPGKWMLCASFILPKSVAFANTAVDA 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04496 575 Hamap tRNA (guanine(37)-N1)-methyltransferase [TRMT5]. 64 564 IPR025792 GO:0009019|GO:0030488
Tsu02g04496 575 Pfam Met-10+ like-protein 301 500 IPR030382 -
Tsu02g04496 575 Gene3D - 283 361 - -
Tsu02g04496 575 PANTHER TRNA (GUANINE(37)-N1)-METHYLTRANSFERASE 2 33 572 - -
Tsu02g04496 575 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 298 564 IPR029063 -
Tsu02g04496 575 ProSiteProfiles SAM-dependent methyltransferase TRM5/TYW2-type domain profile. 302 564 IPR030382 -
Tsu02g04496 575 Gene3D Vaccinia Virus protein VP39 365 562 IPR029063 -
Tsu02g04496 575 PANTHER TRNA METHYLTRANSFERASE 33 572 - -
Tsu02g04496 575 CDD AdoMet_MTases 405 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04496 Tsu-Chr2 53846095 53853721 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04496 K15429 - gmx:100793959 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04496 02 53846095 53853721 Tsu02g04496 02 53846095 53853721 ECH