Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04466 ATGGATGTCTTAAGCAACAAAATtttaatgtttgttttgtttttatttgtatttgtatcaTCATGTGTTATGTGTATCAATGTTGATATTCAAACATGCACCAGCCGAAAGAGCCGTTGTTTTCTCAAGAAAATGCCTTGTCCGGCTCAATGTCCTTCAAAATCACCAGCTAACCCGAGAGACAAAGTTTGCTATCTTGATTGTGATTCTCCTTTGTGCAAAACTCAGTGCAAAAGTCGTAAACCAAATTGTAATGGTCGCGGATCTGCATGCTTAGATCCTCGGTTCGTTGGTGCGGATGGAATTGTTTTCTACTTTCATGGAAGGAGAAATGAGCATTTCAGCTTAGTATCTGATGTCAACCTTCAAATCAATGCTCGTTTTATCGGCCTCAGGCCAACAGGGAGACCAAGGGATTATACTTGGATTCAAGCATTGGGAGTCCTCTTTGATTCACACAACTTTTCTGTTGAGGCCACGCCATCATCAATTTGGGATGACGAAGTTGACCATTTGAAGCTCTCTTATGACGGAAAGGAACTCGTAATTCCAGAAGGTCACCTCTCTACATGGCAATCTGAGGAAAATCAACTAAGAGTCGAGAGAACATCGAATGAGAACGGCGTCATGGTTACCATCCCAGAAGTTGCTGAAATATCTGTCAATGTGGTGCCTGTTACCAAGGAAGACAGTAGAATCCATAACTATCAGATTCCTAATGATGATTGTTTCGCTCATTTGGAGGTGCAGTTCAAATTCTATGGTTTATCGTCCAAAGTTGAAGGAGTTCTCGGTAGGACTTATCAGCCTGATTTTCAAAATCCGGCAAAGCCAGGTGTGGCAATGCCGGTAGTTGGCGGGGAAGACAAGTATAGAACCACGTCACTTGTTTCGGCCGACTGTAACACTTGTATATTCTCTTCTACTGCTAAAGATTCAATGCAGGAAGGCATGGAGATAGAATATGGTATGATGGATTGCACTAGTGGTGCCAGCAGTGGTAATGGTATAGTTTGCAGAAGATAA 1026 0.4123 MDVLSNKILMFVLFLFVFVSSCVMCINVDIQTCTSRKSRCFLKKMPCPAQCPSKSPANPRDKVCYLDCDSPLCKTQCKSRKPNCNGRGSACLDPRFVGADGIVFYFHGRRNEHFSLVSDVNLQINARFIGLRPTGRPRDYTWIQALGVLFDSHNFSVEATPSSIWDDEVDHLKLSYDGKELVIPEGHLSTWQSEENQLRVERTSNENGVMVTIPEVAEISVNVVPVTKEDSRIHNYQIPNDDCFAHLEVQFKFYGLSSKVEGVLGRTYQPDFQNPAKPGVAMPVVGGEDKYRTTSLVSADCNTCIFSSTAKDSMQEGMEIEYGMMDCTSGASSGNGIVCRR 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04466 341 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Tsu02g04466 341 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) PROTEIN-LIKE PROTEIN 5 341 - -
Tsu02g04466 341 Pfam Root cap 250 306 IPR009646 -
Tsu02g04466 341 PANTHER ROOT CAP DOMAIN-CONTAINING PROTEIN 5 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04466 Tsu-Chr2 53583370 53584649 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04466 - - csin:114324035 510.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04466 02 53583370 53584649 Tsu02g04466 02 53583370 53584649 ECH