LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu02g04460	ATGGCCAACTTCCTCGCTCAGTTTCAAACCATTAAAAACTCCTCCGATCGCCTCGTCATTTCCGTGGAGGATGTGAGTGACTTGTGGCCAACTGTCAAGCCTGCTTTTGAAGGGCGGTTGCCGTTCAAAAGGGCGAGTTTGAATAACAAGACGAGGAACCCTGTTTTGGTTGAGAAATTGCCGGCTGAGTTCATATTAACTACAGATTCAAGGCTCCGTAGCCGGTTTCCTCAGGAGCAGTTGTTGTTTTGGTTTCGAGAGCCGTATGCAACTGTTGTGCTTGTTACGTGCGAGGATCTTGATGAGTTTAAAACCATCCTTAAACCGCGCCTGAAATTAATTGTCCAGAATGATGAAAGGGAATGGTTTATTGTATTTGTATCTAAAGCTCATCCAGCTAATGATCAGGCTACCAAAATGGCAAAGAAAGTATATGCTAAACTTGAAGTTGATTTTAGCTCCAGAAAAAGAGAAAGATGCTGCAAATATGATATGCATTTCCCTGAAGCAAATTTTTGGGAGGATCTGGAATCAAAGATAATGGAATGCATCAGAAATACACTGGATAGGCGTGTACAGTTTTATGAAGATGAGATACGGAAGCTCAGTGAACAGCGCCTCATGCCAGTCTGGAACTTctgtaattttttcattctgAAGGAAAGCTTGGCCTTTATCTTTGAAATGGCCCACCTTCATGAAGATGCCTTGCGGGAGTATGATGAACTAGAACTTTGCTATCTTGAAACAGTTAACATGGCTGGAAAGCAAAGAGACTTTGGTGGGGCAGACCACGGTGACGATCAGGCAGCAATTATTAATCCAGGAAACAAAGCATTGACACAAATTGTCCAAGAGGATTCGTTTAGAGAGTTTGAATTCAGACAGTATCTGTTCTCCCGTCAATCAAAGCTCTTATTCAAGCTAAATCGACCTATTGAGGTAGCATCACGAGGttattcattcatattaagCTTCTCAAAATCCTTGGCATTGCATGAGCGTATTCTGCCTTTTTGTATGCGTGAAGTCTGGGTGATAACTGCTTGCTTGGCGTTAATTGAAGCTACCACTTCCAACTATAGTGATGGACTTGTGGCACCTGACGTAGAGAAGGAGTTCTTTCGTCTTCTTGGTGACCTATATTCACTAGCCAGAGTAAAGTTCATGAGGCTAGCATATTTAATTGGGTATGGATCTGATATAGAAAGAAGTCCTGTCAACAGTGCTTCCCTCAGTTTGCTACCTTGGCCTAAGCCAGCTGTTTGGCCTTCAGTTCCTGCGGATGCATCAACAGAGGTGCTTGACAAAGAAAAGTTGATTCTCCAAACAACTCCTTCAACCAAGCACTTTGGTATCCAGAGGAAACCCCTGCCCCTTGAACCTACTGTGCTTCTACGAGAGGCCAACAGGCGGAGGGCTTCACTTTCCGCTGGAAATGTTTTTGAAATGTTTGACAGTCGCCAGGGTCCAATGGAAGGATCAGGTTTTGATGCATCCGCTAAGATGTCACCACAAAAAGTACTTTCGAGTTCGATGACACGCACTAATTCTTCTCCGGGAAACTTTGATGGCTCAATTGACCGACCTATGAGGCTTGCCGAGATTTATATTGCTGCTGAACATGCTTTGAAGAAAACAATTTCTAATCTTGAGATGTtaaaatcattatcatcatccgAGGAGTTTGAGAAAAAATATCTAGAGCTAACTAAAGGTGCTGCTGACAATTACCACCGTTCCTGGTGGAAAAGACATGGAGTTGTCCTTGATGGTGAGATAGCTTCTGTTGCCTTTAAACATGGACATTTTGACCAAGCTGCAAAGTCATATGAGAAGGTCTGTGCACTGTATAATGGGGAAGGATGGCAGGAGTTGTTGGCTGAGGTCCTTCCCATTCTAGCCGAGTGTCAGAAGATTCTTAATGATCAAGCTGGCTACTTGCTGGCCTGTGTGCGGTTACTTTCTCTTGAAGATGGATTATTTGTGACAAAGGAGCGTCAAGCTTTTCAGGCAGAAGTGGTTCGTCTTGCCCATAGTGAAATGAAGGACCCTGTTCCTCTTGATGTATCATCATTAATTACATTTTCTGGAAATCCTGGGCCTCCATTGGAGTTGTGCGATAGGGATCCTGGTATCCTTTCTGTAACTGTCTGCAGTGGTTTTCCGGATGACATAACTCTCGACTCAATCAGTCTTACATTAATGGCAACATCTAATGCAGACGAAGGTGTAAAGgcCTTGAAGAGTTCTACAGCTATTGTATTACACCCTGGTCGGAATACTATCACCTTGGATTTACCACCTCAGAAACCAGGATCATATGTTCTTGGAGTTCTTACTGGGCAGATTGGGCAGTTGAGGTTTAGATCTCACGGATTTTCAAAAGTTGGTCCTGCAGAGAGTGATGATGTTATGAGTTATGAAAAGCCAGCTAAACCCATTTTGAAGGTTTCCAAACCTAGAGCCCTTGTTGATCTTGATGCTGCTGTTTCATCTGCTCTGTTAATAAATGAACACCAATGGCTTGGCATTTTAGTCCGGCCATTAAATTACTCCCTAAAGGCTGCTGTCTTGCATATTGATACTGGTCCAGGATTGGAGATTGAAGAGACACACATAATTGAGATGGAAAGCTATGCTGGTGTATCAGAGAATGATGATGACGAGGTGCAGAAAGATGGTGCTCAAATAGATTCTTTGAATtctgagaaaaagtttgaacgGTCGACTCTTCATGATGGGAAAATTGTGTTTCCGAATTGGGCAAGCGACACTCCTTCTATACTTTGGGTTCTAATTCGTGCCATCAGTGACACGCTGAACAGAGGATCATCTTCAGTGACAACAAGGAGAGAGAGTATTGTAGATGGAATGAGAACAATAGCTCTAAAACTTGAATTTGGAGCATTCCACAATCAGATATTTGAAAGGACCCTAGCAGTGCATTTTACACATCCTTTCTATGTGAGGACACGTGTTACTGATAAATGCAATGATGGTACCCTGCTTCTGCAGGTAATACTTCACTCTGAAGTAAAGGCTACATTGACCATATACGATGCTTGGCTTGATCTTCAAGATGGATTTGTTCATTCTGGACAAACTGAGGGTAGACCTAATTCAAAATTCTTCCCACTAATCATATCTCCCACTTCCAAAGGAGGAATTTTGTTTAGTATCTCCCTAGACAAGACAAATGCAGAAGaAGCCGTGACGCAACCAGAAAGcatattaaatatcaaatatggAATTTCTGGTGATAGAGCAATTGGAGCCCATCCTCCTTTTATAAATGAATCTACTGGAGTTGATAGTGCTAGACAGGAGTTGATCTTCAAGAGTGTAATTGTTTTGCAAAGGCCTGTGCTTGATCCATGCCTAGCTGTTGGTTTTCTTCCTCTCCCTTCAGATGGCATAAGAGTTGGACAACTAGTTAAGATGCAATGGAGGGTAGAAAGGTTGAAGGAtttgaatgaaaaagaaatttCTGAACAGAATGTAAGTACCCAGTAA	3516	0.4147	MANFLAQFQTIKNSSDRLVISVEDVSDLWPTVKPAFEGRLPFKRASLNNKTRNPVLVEKLPAEFILTTDSRLRSRFPQEQLLFWFREPYATVVLVTCEDLDEFKTILKPRLKLIVQNDEREWFIVFVSKAHPANDQATKMAKKVYAKLEVDFSSRKRERCCKYDMHFPEANFWEDLESKIMECIRNTLDRRVQFYEDEIRKLSEQRLMPVWNFCNFFILKESLAFIFEMAHLHEDALREYDELELCYLETVNMAGKQRDFGGADHGDDQAAIINPGNKALTQIVQEDSFREFEFRQYLFSRQSKLLFKLNRPIEVASRGYSFILSFSKSLALHERILPFCMREVWVITACLALIEATTSNYSDGLVAPDVEKEFFRLLGDLYSLARVKFMRLAYLIGYGSDIERSPVNSASLSLLPWPKPAVWPSVPADASTEVLDKEKLILQTTPSTKHFGIQRKPLPLEPTVLLREANRRRASLSAGNVFEMFDSRQGPMEGSGFDASAKMSPQKVLSSSMTRTNSSPGNFDGSIDRPMRLAEIYIAAEHALKKTISNLEMLKSLSSSEEFEKKYLELTKGAADNYHRSWWKRHGVVLDGEIASVAFKHGHFDQAAKSYEKVCALYNGEGWQELLAEVLPILAECQKILNDQAGYLLACVRLLSLEDGLFVTKERQAFQAEVVRLAHSEMKDPVPLDVSSLITFSGNPGPPLELCDRDPGILSVTVCSGFPDDITLDSISLTLMATSNADEGVKALKSSTAIVLHPGRNTITLDLPPQKPGSYVLGVLTGQIGQLRFRSHGFSKVGPAESDDVMSYEKPAKPILKVSKPRALVDLDAAVSSALLINEHQWLGILVRPLNYSLKAAVLHIDTGPGLEIEETHIIEMESYAGVSENDDDEVQKDGAQIDSLNSEKKFERSTLHDGKIVFPNWASDTPSILWVLIRAISDTLNRGSSSVTTRRESIVDGMRTIALKLEFGAFHNQIFERTLAVHFTHPFYVRTRVTDKCNDGTLLLQVILHSEVKATLTIYDAWLDLQDGFVHSGQTEGRPNSKFFPLIISPTSKGGILFSISLDKTNAEEAVTQPESILNIKYGISGDRAIGAHPPFINESTGVDSARQELIFKSVIVLQRPVLDPCLAVGFLPLPSDGIRVGQLVKMQWRVERLKDLNEKEISEQNVSTQ	1171

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu02g04460	1171	PANTHER	BNAC09G30770D PROTEIN	1	1166	-	-
	Tsu02g04460	1171	PANTHER	EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1	1	1166	IPR045126	GO:0048193\|GO:1990071
	Tsu02g04460	1171	Coils	Coil	185	205	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu02g04460	K20307		-	gmx:100787264	2102.41

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tsu02g04460	02	53493432	53505075	Tsu02g04460	02	53493432	53505075	ECH