Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04459 ATGGCGTCGGTTCACAACACCGTGCCACACCACAGTTTCTTATCTTCAATCTCCAAAGCAAAATCAAAACCGAATTCATCCATTTCCAAGGTACAAATCTTTCCGGCGAGATTTTCCGTTAATCCGAATTTCTCGAGAAACAAAAGGACGATACTAGCGACGAAATTATCGACGGAGGAGTTCGACGTGATAGAAGTTCAGAGTAACGATAGTACGGACCAGTCAGAAGGTTTGACAGTGAGTCGTGTGGAAATGGACGGTGGAGATGGTGAATTAGCGACGCAGGTGAATGGATTTGCAGCGAATGAGGGTTTGTTATCGTTGGAAgggttttcttcttcttcttcttcttctacttcggGTTTGGTTGGTAATGAGAATGAAGAGAGTGTTGAGAAGCTTCTAGATAGGAGTATTAATGCTAGTATTGTTCTTGCTGCTGGTACTTTTGCTCTTACTAAGCTTCTTACCATTGATAGTGATTATTGGCATGGATGGACGATTTATGAGATAGTAAGATATGCACCTCTGCACAACTGGTTGGCTTATGAGGAAGCTCTTAAGACAAATCCGGTTTTTGCCAAGATGGTGATTAGTGGAGTTGTTTATTCTGTAGGAGACTGGATTGCGCAGTGCTTTGAAGGAAAGCCTCTTTTCGAGTTTGATCGGGCACGGATGTTCAGATCAGGGCTTGTTGGTTTTGCTCTACACGGCTctctttctcattattattacCAGTTTTGTGAGGAGCTATTTCCTTACAAAGAATGGTGGGTGGTTCCTGTCAAAGTTGCCTTCGATCAAACTGCATGGTCGGCAGTTTGGAACAGCATTTATTATACGGTTGTTGCGATCCTGCGTCTTGATTCTCCGATCAatattttcaatgaattgaCGGCAACATTTTTCCCCATGTTGACTGTAAGAGAATCTTCTGGCTCTTCCGATTCATCTGTTGCACGCAAAAAGTTCATGTTGTTCTTTGAGAACCAATGGTGCTATACAGTATACATTACCTTGCAACTTCTTGCTACTAATgtttctttaaattttcttttacaGGCAGGATGGAAACTGTGGCCATTTGCTCATCTAATTACTTACGGTGTAATACCAGTCGAGCAAAGACTTCTTTGGGTGGATATGATAGAGCTTATTTGGGTGACCATACTTTCTACATATTCAAATGAAAAATCAGAAGCAAGAAGCTCTCCGGTGCCTATAGAAGTGAACTCCACTACATCTGAGGAGTAA 1254 0.3963 MASVHNTVPHHSFLSSISKAKSKPNSSISKVQIFPARFSVNPNFSRNKRTILATKLSTEEFDVIEVQSNDSTDQSEGLTVSRVEMDGGDGELATQVNGFAANEGLLSLEGFSSSSSSSTSGLVGNENEESVEKLLDRSINASIVLAAGTFALTKLLTIDSDYWHGWTIYEIVRYAPLHNWLAYEEALKTNPVFAKMVISGVVYSVGDWIAQCFEGKPLFEFDRARMFRSGLVGFALHGSLSHYYYQFCEELFPYKEWWVVPVKVAFDQTAWSAVWNSIYYTVVAILRLDSPINIFNELTATFFPMLTVRESSGSSDSSVARKKFMLFFENQWCYTVYITLQLLATNVSLNFLLQAGWKLWPFAHLITYGVIPVEQRLLWVDMIELIWVTILSTYSNEKSEARSSPVPIEVNSTTSEE 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04459 417 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 46 307 IPR007248 GO:0016021
Tsu02g04459 417 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 352 415 IPR007248 GO:0016021
Tsu02g04459 417 Pfam Mpv17 / PMP22 family 353 392 IPR007248 GO:0016021
Tsu02g04459 417 PANTHER PEROXISOMAL MEMBRANE 22 KDA FAMILY PROTEIN 46 307 - -
Tsu02g04459 417 PANTHER PEROXISOMAL MEMBRANE 22 KDA FAMILY PROTEIN 352 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04459 Tsu-Chr2 53486996 53490112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu02g04459 183 306 Miscellaneous Gene Families AT2G14860 26.613 4.46e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04459 K13348 - gmx:100805057 513.842
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04459 02 53486996 53490112 Tsu02g04459 02 53486996 53490112 ECH