LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tsu02g04445	ATGGATCCAAGTTCTTATCTTGATCATGCCCTTTTTCAACTCACTCCAACAAGAACAAGATGTGACTTGATGATTGTTTCTGGTGGTGTTAGTGAAAGACTAGCTTCTGGGCTGTTAGAACCTTTTATTTCTCATCTTAAATGTGCCAAAGATCAGATTTCAAAAGGTGGCTATTCAATCACTTTATGTCCTGTTGTTACATTTGCTCCTTGGTTCACCAAAGCCACCCTTCaaagGTTTGTTAAATTTGTAAGCACTCCAGAAGTTCTTGAGAGGTTTGTGACCATAGAAAAGGAGATTGTGCAGATTGAAGGTTCAATTCAATCAAGTGAGGCAGAAGGAAATGTGTTATATGCCGAGGGGCGTGCCAAAAGGTCAAGTATTTCGTCCAATCAAGATGGATCTGAAGAGAACTCGAGGGTTCGCCTTCAACGTGTTCTAGACAATCGTAAAGCTATGCTTTGCAAAGAACAAGCAATGGCTTATGCACGTGCTTTAGTTGCAGGATTCTATCCAGAATCAATGGATGATCTTATCTCTTTCGCTGATGCTTTTGGAGCTTCGCGTTTAAGGGAAGCATGCTTAAATTTCTTAGAGCTGTGCAAACAAAAGAACGAAGACAAGCTTTGGATGGATGAAATTGCAGCCATGCAGGTGTCGTCTCAACCCGTATTGCCTTACTTGAGGACTTCCGGAATCATACTTGCAGGCGAAGATGACTCAGTCAGTAAGCTAAATGGCTTAGGTGATGCCTCAATTTCTGGTTCAACCCCAAGCCATGCAAGTTTGGACATTGGACAAGAATATAGCTTGCCAGCAGCAGGTCAAACTCCGTCATCGGATGGAAGGGCTCAAATGCCAATGTCGTGGCCGAACCATCATCCGCAGTACATTCACAATTTTCAAGGTCATGCATTTCAACAAATGCCTCCGTACCAAGGATACATGTATCCCGGTATGCAGGTTCCGTCTTCATACTATCCAGGGAATATGCAATGGCCTCCAAACGAGGATCGCTCacacaagaaaaagaagaagaaaaacaaacaatctcaAGTAGCGGATAACTCTGAAGAAGATGACTCAACTACATCGTCTGAGTATACTGATGAGAGTGATTCAGATTCCGACTCAAAGCAAAGCAAAAAGAAATCTTCAACGGAGCATTTGCGCAAAAAGAAGCATGGAAAGAAATCCTCAAGGAAAGTAGTTATCCGTAATATAAACTATATAACTTCCAAGGGAGATGACGAAAAAGGTAGTATCACAGAGGGGAGTTTGTCGAATGAGGAAGAATTTATCAATGGAGATTCCTTGAAACACAAGGTTGAAGAAGCTGTTGCATCACTGGAGAAAAGAAACAAGTCAACCTCGAGTCACCGTAAGCAACAACGTAGTGCAGAAAACCTTGAAAATGTAAATGGTTCAACCAATGCTGATTCGAATGGCAAGAAAGGCGGTAACAACTGGGATGCTTTCCAGAATCTTCTTTTGAGAGAAGACGATGATTCTACTCCTGATACCGAACAACAGCCTATGATGTTTCATGAAGAATATATGATGAACAAGAATTTGGCAGATGGAAGGTCAAATGAATATAACCGTGAAGCGGAAATCACTAAAACTCGAGTAGTTTCAAATGATTCCTTTGTTGTGGCGCAAAGAGAATTGAATGGTGAGAGTCGAGATCGTGTTGCGTACTTCGACGAAGGGAAGGATGGACCTACATCTGTGCagagaaagaaaattaatgATGAGGAGTTGTTGTTTTCTCGGAGAAATGAAGAATCGGATAGCTATTATGTGTCATCTTCTGCTACAGATCGTTTACCTgaagagaaaaacaagaaaaacattTTGGCTGATGACTCTTTTATGGTTCAAGCTCGACCATCACAAGGTCAATTTAATTCTCAATCAGCTGCTGATATAAGTTTGGTGTCAGACATTATCGGCGCTACTGAATTCAAAAATGGCACACAAGAAGGTTCGCACAAGAAGACCGGGACTATAATTTCTCATGAGCCGGAAGATCTGTTGATGGTTCTTGGTCGCGATTCAGCTGTAGAGCATAATGCAACACCTTGGAGAATGGAAATGGATTAtgaaaataacatttcattatatgaagcaaataaaaaacaatctgATGTTGAACCTGATGAAAACCGTGTAGACACCGATAAGAAAGCTACTGGAGTGAAAACTGGGAAAGTTTCAAGTAAAGAGGCAAAGTCAAAGGCTCCAAATGCATCTCTTGGGAAAAGCAAATCTGATATCATGTCAAGAAGTAGAGCATTACCAGGAAGCAGAACTACGGCTACAAAGAGCAAAACCGAGAAGgaagaagaaaatagaaagagaagGGAAGAGTTAATGATCCAGCGACAGAAAAGAATTGCTGAAAGAAGTGCCTCGAAGACAGGCACGAAGACTGCTGCAAAGAAAGGGAATCCTAATATACATCCATCTAATGAAGAGACTAAGAAACCGAACAAAACAGTCCTTAGGAGTTCAACCATTGATCGTCTTGCAACTGCTCGAGTAACTCAGCAGAAGGTTTTGCCGAGTCAAACAAAACCAGGTCCAACAAAGAAACCTTCCTTGAAGGCAAATGGAGTACCTTTGCAGAAGAAACCGCTCCAAAAAGAAGTCAAATCTTCAAATCATAAAGAAGACGCGCGTAAAACAAAAGGGAAAGTTCTCTCCGAGACTAACGGGAAGACTAAGAATGAAATCAAAGCTTCGGCAGTGTTGCCTATCAAACCTGATGCCGCACAAGCTGtcgaacaaaacaacaacaatcgTGAGATATCCAAGGCATCACCGGAGAAACATTCAAGATATTTAACTTCAGAAAGAGAAATTGCAGATGAAAATATTCGCCAACTTCACACTAGCTCACCTTTGCCAAATCAGTCTAGAGGTGAGGAAGTATCAGACAAGTTATCTTCGCTTCCTGGCGATAATAACCAACCTCGGCATAATACTGAAATGATCACAACTTCTACAGTTGCATTACCTACAAACCCATTAATAAATACTGGTTTGGATTCAAAGGTTAATCATAAAATAGATGAAAATAATGTTACACCACCTAAAGTCTCAGAGATAGAAATCTTTACCCCTCCACCAAGTAACCAAGTGATGCAAGAATCAACCCACAACAGGAAAAAATGGATTAATGAGGAAGAGGACTCTTCAAAAGCGGTGAAAGGATTCCGTAAGCTTCTCTTCTTTGGAAGAAGAAGCTGA	3255	0.3948	MDPSSYLDHALFQLTPTRTRCDLMIVSGGVSERLASGLLEPFISHLKCAKDQISKGGYSITLCPVVTFAPWFTKATLQRFVKFVSTPEVLERFVTIEKEIVQIEGSIQSSEAEGNVLYAEGRAKRSSISSNQDGSEENSRVRLQRVLDNRKAMLCKEQAMAYARALVAGFYPESMDDLISFADAFGASRLREACLNFLELCKQKNEDKLWMDEIAAMQVSSQPVLPYLRTSGIILAGEDDSVSKLNGLGDASISGSTPSHASLDIGQEYSLPAAGQTPSSDGRAQMPMSWPNHHPQYIHNFQGHAFQQMPPYQGYMYPGMQVPSSYYPGNMQWPPNEDRSHKKKKKKNKQSQVADNSEEDDSTTSSEYTDESDSDSDSKQSKKKSSTEHLRKKKHGKKSSRKVVIRNINYITSKGDDEKGSITEGSLSNEEEFINGDSLKHKVEEAVASLEKRNKSTSSHRKQQRSAENLENVNGSTNADSNGKKGGNNWDAFQNLLLREDDDSTPDTEQQPMMFHEEYMMNKNLADGRSNEYNREAEITKTRVVSNDSFVVAQRELNGESRDRVAYFDEGKDGPTSVQRKKINDEELLFSRRNEESDSYYVSSSATDRLPEEKNKKNILADDSFMVQARPSQGQFNSQSAADISLVSDIIGATEFKNGTQEGSHKKTGTIISHEPEDLLMVLGRDSAVEHNATPWRMEMDYENNISLYEANKKQSDVEPDENRVDTDKKATGVKTGKVSSKEAKSKAPNASLGKSKSDIMSRSRALPGSRTTATKSKTEKEEENRKRREELMIQRQKRIAERSASKTGTKTAAKKGNPNIHPSNEETKKPNKTVLRSSTIDRLATARVTQQKVLPSQTKPGPTKKPSLKANGVPLQKKPLQKEVKSSNHKEDARKTKGKVLSETNGKTKNEIKASAVLPIKPDAAQAVEQNNNNREISKASPEKHSRYLTSEREIADENIRQLHTSSPLPNQSRGEEVSDKLSSLPGDNNQPRHNTEMITTSTVALPTNPLINTGLDSKVNHKIDENNVTPPKVSEIEIFTPPPSNQVMQESTHNRKKWINEEEDSSKAVKGFRKLLFFGRRS	1084

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Tsu02g04445	1084	MobiDBLite	consensus disorder prediction	806	821	-	-
	Tsu02g04445	1084	MobiDBLite	consensus disorder prediction	775	805	-	-
	Tsu02g04445	1084	MobiDBLite	consensus disorder prediction	939	961	-	-
	Tsu02g04445	1084	MobiDBLite	consensus disorder prediction	712	997	-	-
	Tsu02g04445	1084	MobiDBLite	consensus disorder prediction	434	467	-	-
	Tsu02g04445	1084	MobiDBLite	consensus disorder prediction	743	774	-	-
	Tsu02g04445	1084	MobiDBLite	consensus disorder prediction	271	295	-	-
	Tsu02g04445	1084	MobiDBLite	consensus disorder prediction	328	510	-	-
	Tsu02g04445	1084	PANTHER	COP1-INTERACTING PROTEIN-RELATED	1	1084	-	-
	Tsu02g04445	1084	MobiDBLite	consensus disorder prediction	834	865	-	-
	Tsu02g04445	1084	MobiDBLite	consensus disorder prediction	1034	1057	-	-
	Tsu02g04445	1084	MobiDBLite	consensus disorder prediction	883	907	-	-
	Tsu02g04445	1084	MobiDBLite	consensus disorder prediction	962	997	-	-
	Tsu02g04445	1084	MobiDBLite	consensus disorder prediction	272	286	-	-
	Tsu02g04445	1084	MobiDBLite	consensus disorder prediction	468	489	-	-
	Tsu02g04445	1084	MobiDBLite	consensus disorder prediction	714	742	-	-
	Tsu02g04445	1084	MobiDBLite	consensus disorder prediction	1041	1055	-	-
	Tsu02g04445	1084	PANTHER	COP1-INTERACTING PROTEIN 7	1	1084	-	-
	Tsu02g04445	1084	MobiDBLite	consensus disorder prediction	385	402	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Tsu02g04445	Tsu-Chr2	53323934	53329316	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tsu02g04445	-		-	mtr:MTR_2g079850	1564.67

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tsu02g04445	02	53323934	53329316	Tsu02g04445	02	53323934	53329316	ECH