Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu02g04418 ATGAGGGGTTCTTTGGGTGCTGTAATAGGGAGATATAACCCATCAAGTAATGGAACTATCCATATGGGTGGAAATGGGATCATAAACCATAACAGGAAATGCAAAGacatagttttttttgtcatttttattgCCTTTTGGGTTGCAATGATTGTTAATTCCAGCTTTGCTTTCAACAAAGGAAACCCATTAAGGCTTACTTATGGGCTAGACTACAAAGGAAATGTGTGTGGGGACAAACATGCAGGCCTTCATCAATTGGAGCTGAAATACTGGCTAAATCCTAATCAGGTTTATCAAAGTGGATCGAAAGATAGTCAGTTTAAACTGGCCGATGCTCATAGTATATGTTTGTTGGACTGCCCTATTCCTTTGGAAGATTCACTTACTTGGGTGTGTAATTATCCGGAAGGAGATATTCATATTTCAATGGATGATTGGATTGATATGAACTATAATTATTATGAGTTCCTCACACCAGAAATGAGAAACTCCTCACTTCAACTTCAAGGCCCTTGTTTTCCTGTCATATTTCCAACTGTAAATGTATACTGGAGTTGCCAATTCATTGCGAGAGCATCAAATGTGTCCTTAACACATTGGCAGCAAATGGGTGGAGTTCACATCAATGAAGACACTGTTATTGATAAGTCCATTCACAAGTATATCAATTCTCACTCAGCTGTCTTAaagaGATACATGGCTGACATAGGAAAGGCATGGCCTGTGCTGATTGTTTGTGGCGGGATTTTACCTTTGTTTCTCTCTGTGATTTGGCTGCTGATGATCCGACATTTTGTTGCTGCAATGCCTTGGATAACAGTtgttttctttgatcttctaaTAGTATCAGTTACGATGTTCTACTATCTAAAAGTTGGATGGATAGGAAATGACGCTATAACACCCATCATTGGCGAGCATGATCCTTACATTCATATATATGGAAGGGAGCTTACTCATCTAAGTGTTGTCACTATCCTTATGACTTTTATCATGGTTGTTTCCATTCTTACATCAATTGCTATTGTTCGGCGCATCCTTATGGCAACTTCTGTTCTTAAGGTTGCAGCAAAAGTGATAGGAGAAGTTCAAGCACTTATTATTTTCCCAATCATACCATACGGTATCCTTGCAGTGTTCTACATGTTATGGATTTCGGCTTTTCTCCATTTATTCAGCTCTGGTCAGGTTGTTCAGAATGACTGCCACTCTAACTGCTGCTCATATGACCTCATGGAAAAGCGTGTGAACTGTGACCGTTGTTGTGGATATAGCATTCGTTACATGCCCCATATTGGAGTTGCCATCCTCTTTCACCTGTTTGGTTGTTATTGGGTTACACAATTTTTCATAGCATGCTCATCAACAGTTATTGCCGGATCAGTCGCCTCTTATTATTGGGGACATGGTGAAGTATCCCCAGATATTCCTTTCCTTTCCGTCTTTTCCTCCATGAAGAGACTTATGCGTTACAGTCTTGGTTCTTTAGCTCTTGGATCTCTAACTGTATCATTTGTAGAATTAATACGCTTTATGCTTGAATCTATTCGCCGAAAACTGAAAGTCTCAAGTCATGTGCCAGACAACTGGTTCGGAAAGGCTGCATACCATTCGTCTCAATTTTTTCTAAGGTGTATTGAGTGGACCGTCAAATCAGTGAACCGAAATGCTTATATCATGATTGCTATAACCGGTAAAAGTTTCTTTAGAGCTTCAGCTATTGCAACTAGTTTGATTAAGAATAACATCCTACGGATTGGACGTGTCAATGTGATTGGAGACGTTATATTGTTCCTCGGAAAACTATGTGTCAGTCTTTCAAGTGCTGTTTTTGCTTTCCTCATGTTAGACACTCACAAGTACAAATCGGCACATAACAAGATCTCATCTCCACTCTTTCCTGTTATGGTTTGCTGCGCTCTTGGATATATTGTTGCGACTCTTTTCTTTGGAGTTATAGAGATGTCAATTGACACCATCATTCTCTCATTCTGTCAAGATTCTGAAGAGCATGGAACAGCACAATATGCTCCTCCTCTTCTCATTGAAACTCTTAGTGACCAAAATGAGATGCAAAGACTTACACAAGGACctcaataa 2103 0.388 MRGSLGAVIGRYNPSSNGTIHMGGNGIINHNRKCKDIVFFVIFIAFWVAMIVNSSFAFNKGNPLRLTYGLDYKGNVCGDKHAGLHQLELKYWLNPNQVYQSGSKDSQFKLADAHSICLLDCPIPLEDSLTWVCNYPEGDIHISMDDWIDMNYNYYEFLTPEMRNSSLQLQGPCFPVIFPTVNVYWSCQFIARASNVSLTHWQQMGGVHINEDTVIDKSIHKYINSHSAVLKRYMADIGKAWPVLIVCGGILPLFLSVIWLLMIRHFVAAMPWITVVFFDLLIVSVTMFYYLKVGWIGNDAITPIIGEHDPYIHIYGRELTHLSVVTILMTFIMVVSILTSIAIVRRILMATSVLKVAAKVIGEVQALIIFPIIPYGILAVFYMLWISAFLHLFSSGQVVQNDCHSNCCSYDLMEKRVNCDRCCGYSIRYMPHIGVAILFHLFGCYWVTQFFIACSSTVIAGSVASYYWGHGEVSPDIPFLSVFSSMKRLMRYSLGSLALGSLTVSFVELIRFMLESIRRKLKVSSHVPDNWFGKAAYHSSQFFLRCIEWTVKSVNRNAYIMIAITGKSFFRASAIATSLIKNNILRIGRVNVIGDVILFLGKLCVSLSSAVFAFLMLDTHKYKSAHNKISSPLFPVMVCCALGYIVATLFFGVIEMSIDTIILSFCQDSEEHGTAQYAPPLLIETLSDQNEMQRLTQGPQ 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu02g04418 700 PANTHER PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN 3 697 - -
Tsu02g04418 700 PANTHER CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) 3 697 IPR007603 GO:0022857|GO:0055085
Tsu02g04418 700 Pfam Plasma-membrane choline transporter 327 670 IPR007603 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu02g04418 Tsu-Chr2 52984925 52990066 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu02g04418 K15377 - gmx:100779959 1242.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu02g04418 02 52984925 52990066 Tsu02g04418 02 52984925 52990066 ECH